RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 MPP2Q14168 576 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 EFTUD2Q15029 972 aaKnown RBP eCLIP21.59■■□□□ 1.05
RITA1-201ENST00000548278 ANKRD20A2Q5SQ80 823 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 ANKRD20A1Q5TYW2 823 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 ANKRD20A3Q5VUR7 823 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 SCD5Q86SK9 330 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 TP53INP2Q8IXH6 220 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 FUBP3Q96I24 572 aaKnown RBP eCLIP21.59■■□□□ 1.05
RITA1-201ENST00000548278 DEFB118Q96PH6 123 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 PSMC3IPQ9P2W1 217 aaPredicted RBP21.59■■□□□ 1.05
RITA1-201ENST00000548278 ADAM28Q9UKQ2 775 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 SNX10Q9Y5X0 201 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 PPP1R12AO14974 1030 aaPredicted RBP21.59■■□□□ 1.05
RITA1-201ENST00000548278 ATP2A2P16615 1042 aaKnown RBP21.59■■□□□ 1.05
RITA1-201ENST00000548278 MAGEA3P43357 314 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 AP1B1Q10567 949 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 IFRD2Q12894 506 aaPredicted RBP21.59■■□□□ 1.05
RITA1-201ENST00000548278 NFE2Q16621 373 aaPredicted RBP21.59■■□□□ 1.05
RITA1-201ENST00000548278 ZNF534Q76KX8 674 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 SCN4BQ8IWT1 228 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 CRIPAKQ8N1N5 446 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 ZNF317Q96PQ6 595 aaPredicted RBP21.59■■□□□ 1.05
RITA1-201ENST00000548278 ABCC13Q9NSE7 274 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 OR12D3Q9UGF7 316 aa21.59■■□□□ 1.05
RITA1-201ENST00000548278 MYO18AQ92614 2054 aaKnown RBP21.59■■□□□ 1.05
RITA1-201ENST00000548278 MYCP01106 439 aaPredicted RBP21.58■■□□□ 1.05
RITA1-201ENST00000548278 MRPL58Q14197 206 aaKnown RBP21.58■■□□□ 1.05
RITA1-201ENST00000548278 MTFR1Q15390 333 aa21.58■■□□□ 1.05
RITA1-201ENST00000548278 KLHL38Q2WGJ6 581 aa21.58■■□□□ 1.05
RITA1-201ENST00000548278 APBB2Q92870 758 aa21.58■■□□□ 1.05
RITA1-201ENST00000548278 PRMT1Q99873 361 aaKnown RBP21.58■■□□□ 1.05
RITA1-201ENST00000548278 FAM107BQ9H098 131 aa21.58■■□□□ 1.05
RITA1-201ENST00000548278 KCNK9Q9NPC2 374 aa21.58■■□□□ 1.05
RITA1-201ENST00000548278 RAD54BQ9Y620 910 aa21.58■■□□□ 1.05
RITA1-201ENST00000548278 RNF103O00237 685 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 PQBP1O60828 265 aaKnown RBP21.57■■□□□ 1.04
RITA1-201ENST00000548278 OPHN1O60890 802 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 FDFT1P37268 417 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 WASHC5Q12768 1159 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 PKN2Q16513 984 aaKnown RBP21.57■■□□□ 1.04
RITA1-201ENST00000548278 FAM171A1Q5VUB5 890 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 BTBD8Q5XKL5 378 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 FAM43BQ6ZT52 329 aaPredicted RBP21.57■■□□□ 1.04
RITA1-201ENST00000548278 DENND5BQ6ZUT9 1274 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 PDZD4Q76G19 769 aaPredicted RBP21.57■■□□□ 1.04
RITA1-201ENST00000548278 CCNYQ8ND76 341 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 CHMP6Q96FZ7 201 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 EPAS1Q99814 870 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 GPR62Q9BZJ7 368 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 MARCH5Q9NX47 278 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 SCN5AQ14524 2016 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 MYO16Q9Y6X6 1858 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 EBAG9O00559 213 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 IRAK2O43187 625 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 STK10O94804 968 aaKnown RBP21.57■■□□□ 1.04
RITA1-201ENST00000548278 LRIG2O94898 1065 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 NPWQ8N729 165 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 RNF34Q969K3 372 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 MRRFQ96E11 262 aaKnown RBP21.57■■□□□ 1.04
RITA1-201ENST00000548278 C8orf48Q96LL4 319 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 OSBPL2Q9H1P3 480 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 SMOC2Q9H3U7 446 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 NMUR1Q9HB89 426 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 ARHGEF38Q9NXL2 777 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 HCSTQ9UBK5 93 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 OGDHLQ9ULD0 1010 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 LRFN2Q9ULH4 789 aa21.57■■□□□ 1.04
RITA1-201ENST00000548278 TCRBV9S1A1TA0A576 114 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 SPAG6O75602 509 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 PIAS1O75925 651 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 DRD4P21917 467 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 FGFR3P22607 806 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 SLC11A1P49279 550 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 CTXN3Q4LDR2 81 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 ADGRD1Q6QNK2 874 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 PAFAH2Q99487 392 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.56■■□□□ 1.04
RITA1-201ENST00000548278 ALDH2P05091 517 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 GPR15P49685 360 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 QPCTQ16769 361 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 DDR2Q16832 855 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 SDHAF4Q5VUM1 108 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 CEP57Q86XR8 500 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 COLGALT1Q8NBJ5 622 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 MGARPQ8TDB4 240 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 DCAKDQ8WVC6 231 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 LRRC39Q96DD0 335 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 B3GALT6Q96L58 329 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 CYTH2Q99418 400 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 FERMT1Q9BQL6 677 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 PLAC1Q9HBJ0 212 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 SENP1Q9P0U3 644 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 SCML2Q9UQR0 700 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 PCDHB5Q9Y5E4 795 aa21.56■■□□□ 1.04
RITA1-201ENST00000548278 NUP205Q92621 2012 aa21.55■■□□□ 1.04
RITA1-201ENST00000548278 A0A1W2PQH9 124 aa21.55■■□□□ 1.04
RITA1-201ENST00000548278 TRIM66O15016 1216 aa21.55■■□□□ 1.04
RITA1-201ENST00000548278 NCAM2O15394 837 aa21.55■■□□□ 1.04
RITA1-201ENST00000548278 KRT15P19012 456 aa21.55■■□□□ 1.04
RITA1-201ENST00000548278 CYP2C18P33260 490 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 820.7 ms