RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GFRA2O00451 464 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 GIPC1O14908 333 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 PMM2O15305 246 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 P4HA2O15460 535 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 TIMM44O43615 452 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 ZNF217O75362 1048 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 FGFR1OPO95684 399 aaKnown RBP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 AFPP02771 609 aaKnown RBP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 KRT5P13647 590 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 ENGP17813 658 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 MAOBP27338 520 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 USP8P40818 1118 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 IL12RB1P42701 662 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 NOVA1P51513 510 aaKnown RBP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 ATXN3P54252 364 aaPredicted RBP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 DAOAP59103 153 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 GFPT1Q06210 699 aaPredicted RBP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 LMAN2Q12907 356 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 STILQ15468 1287 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 FUT11Q495W5 492 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 MPPE1Q53F39 396 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 SPDYCQ5MJ68 293 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 ADGRF1Q5T601 910 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 SH3PXD2AQ5TCZ1 1133 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 ANKS1BQ7Z6G8 1248 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 TMPRSS6Q8IU80 811 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 TRIM59Q8IWR1 403 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 RGL4Q8IZJ4 473 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 CPXM2Q8N436 756 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 SNIP1Q8TAD8 396 aaKnown RBP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 LMO3Q8TAP4 145 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 CLEC4CQ8WTT0 213 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 PIWIL1Q96J94 861 aaKnown RBP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 KREMEN1Q96MU8 473 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 CRACR2AQ9BSW2 395 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 GTPBP2Q9BX10 602 aaKnown RBP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 SLC2A11Q9BYW1 496 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 INTS2Q9H0H0 1204 aaKnown RBP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 PRDM16Q9HAZ2 1276 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 CD248Q9HCU0 757 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 CD93Q9NPY3 652 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 ST7Q9NRC1 585 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 ELOVL2Q9NXB9 296 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 STIM2Q9P246 746 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 THAP10Q9P2Z0 257 aaPredicted RBP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 PILRBQ9UKJ0 227 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 PLA2G4CQ9UP65 541 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 HBS1LQ9Y450 684 aaKnown RBP6.99□□□□□ -1.29
SCAF11-211ENST00000547950 FANCMQ8IYD8 2048 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 J3QL48 77 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 NPC1O15118 1278 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 TBL1XO60907 577 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 LETM1O95202 739 aaPredicted RBP6.98□□□□□ -1.29
SCAF11-211ENST00000547950 LTFP02788 710 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 EPHX1P07099 455 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 NCAM1P13591 858 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 HLA-EP13747 358 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 HOXD9P28356 352 aaPredicted RBP6.98□□□□□ -1.29
SCAF11-211ENST00000547950 SLC11A2P49281 568 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 SGSHP51688 502 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 TBX4P57082 545 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 GCNT1Q02742 428 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 ZNF234Q14588 700 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 ARHGAP44Q17R89 818 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 DUOXA1Q1HG43 343 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 SYCP2LQ5T4T6 812 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 TMEM215Q68D42 235 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 DENND1BQ6P3S1 775 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 RFWD3Q6PCD5 774 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 GJB7Q6PEY0 223 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 SLC23A3Q6PIS1 610 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 SERPINA13PQ6UXR4 307 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 CHST9Q7L1S5 443 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 CACUL1Q86Y37 369 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 SLC41A1Q8IVJ1 513 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 UNC45BQ8IWX7 931 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 FAM217AQ8IXS0 508 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 SCML4Q8N228 414 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 DEFB124Q8NES8 71 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 CEP76Q8TAP6 659 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 ADAM32Q8TC27 787 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 CYB5D2Q8WUJ1 264 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 IRGQQ8WZA9 623 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 PRCCQ92733 491 aaPredicted RBP6.98□□□□□ -1.29
SCAF11-211ENST00000547950 FAM149B1Q96BN6 582 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 SIPA1Q96FS4 1042 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 TOE1Q96GM8 510 aaKnown RBP6.98□□□□□ -1.29
SCAF11-211ENST00000547950 HSFY1Q96LI6 401 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 HSPA12BQ96MM6 686 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 GPR174Q9BXC1 333 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 MKRN2Q9H000 416 aaKnown RBP6.98□□□□□ -1.29
SCAF11-211ENST00000547950 ACP6Q9NPH0 428 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 ITM2CQ9NQX7 267 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 ABCB8Q9NUT2 735 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 EVLQ9UI08 416 aaPredicted RBP6.98□□□□□ -1.29
SCAF11-211ENST00000547950 SLC6A14Q9UN76 642 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 NAALADL1Q9UQQ1 740 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 DNAH14Q0VDD8 3507 aa6.98□□□□□ -1.29
SCAF11-211ENST00000547950 KCNJ18B7U540 433 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms