RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 PHLDB2Q86SQ0 1253 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 CHSY1Q86X52 802 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 CHPFQ8IZ52 775 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 CAMKK1Q8N5S9 505 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 HJURPQ8NCD3 748 aaPredicted RBP12.27□□□□□ -0.45
RAB5C-204ENST00000547517 AZIN2Q96A70 460 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 ERLEC1Q96DZ1 483 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 MYEOVQ96EZ4 313 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 EPC1Q9H2F5 836 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 SEMA4AQ9H3S1 761 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 TSPY26PQ9H489 355 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.27□□□□□ -0.45
RAB5C-204ENST00000547517 CALCOCO1Q9P1Z2 691 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 STIM2Q9P246 746 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 FBXO10Q9UK96 956 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 HCN2Q9UL51 889 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 STAP1Q9ULZ2 295 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 SMG5Q9UPR3 1016 aaKnown RBP12.27□□□□□ -0.45
RAB5C-204ENST00000547517 SLC27A6Q9Y2P4 619 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 TCRBV21S2A2A0A5A6 115 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 AXIN1O15169 862 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 CCDC172P0C7W6 258 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 UNGP13051 313 aaPredicted RBP12.26□□□□□ -0.45
RAB5C-204ENST00000547517 HOXB2P14652 356 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 HNRNPLP14866 589 aaKnown RBP eCLIP12.26□□□□□ -0.45
RAB5C-204ENST00000547517 ABCB4P21439 1286 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 MMP8P22894 467 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 CCR1P32246 355 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 FLT3P36888 993 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 DGKEP52429 567 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 UBASH3AP57075 661 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 RPS24P62847 133 aaKnown RBP12.26□□□□□ -0.45
RAB5C-204ENST00000547517 CENPCQ03188 943 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 EIF4EBP2Q13542 120 aaPredicted RBP12.26□□□□□ -0.45
RAB5C-204ENST00000547517 NR1I3Q14994 352 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 LPAL2Q16609 132 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 MS4A13Q5J8X5 152 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 TMEM92Q6UXU6 159 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 MFN1Q8IWA4 741 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 LGI2Q8N0V4 545 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 CFAP52Q8N1V2 620 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 ATP6V0D2Q8N8Y2 350 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 WFDC5Q8TCV5 224 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 KCNV2Q8TDN2 545 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 BTN2A3PQ96KV6 586 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 ACOX2Q99424 681 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 TBCBQ99426 244 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 NPY6RQ99463 290 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 AGPAT1Q99943 283 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 HINFPQ9BQA5 517 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 SLC2A11Q9BYW1 496 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 ADAM33Q9BZ11 813 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 TPSD1Q9BZJ3 242 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 CIPCQ9C0C6 399 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 TTYH3Q9C0H2 523 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 ABCB8Q9NUT2 735 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.26□□□□□ -0.45
RAB5C-204ENST00000547517 CACNA2D2Q9NY47 1150 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 IFNKQ9P0W0 207 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 MYO6Q9UM54 1294 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 STARD13Q9Y3M8 1113 aa12.26□□□□□ -0.45
RAB5C-204ENST00000547517 KCNU1A8MYU2 1149 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 F5H5T6 163 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 HRO43593 1189 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 ALDH1A2O94788 518 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 GJB6O95452 261 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 SLC2A3P11169 496 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 TACR2P21452 398 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 HLA-FP30511 346 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 NTSR1P30989 418 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 GGCXP38435 758 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 CDH18Q13634 790 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 SIM2Q14190 667 aaPredicted RBP12.25□□□□□ -0.45
RAB5C-204ENST00000547517 MPP7Q5T2T1 576 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 SFMBT2Q5VUG0 894 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 E4F1Q66K89 784 aaPredicted RBP12.25□□□□□ -0.45
RAB5C-204ENST00000547517 TRNP1Q6NT89 227 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 LRSAM1Q6UWE0 723 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 CEP68Q76N32 757 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 CARNMT1Q8N4J0 409 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 EMC1Q8N766 993 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 SUMF1Q8NBK3 374 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 RNF214Q8ND24 703 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 MDGA1Q8NFP4 955 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 SORCS1Q8WY21 1168 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 CFAP57Q96MR6 1250 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 ANP32EQ9BTT0 268 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 POLMQ9NP87 494 aaPredicted RBP12.25□□□□□ -0.45
RAB5C-204ENST00000547517 PIGVQ9NUD9 493 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 RRN3Q9NYV6 651 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 ADAM22Q9P0K1 906 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 BCCIPQ9P287 314 aaKnown RBP eCLIP12.25□□□□□ -0.45
RAB5C-204ENST00000547517 SLC12A6Q9UHW9 1150 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 GGA2Q9UJY4 613 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 TMEM59LQ9UK28 342 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 RAB23Q9ULC3 237 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 RAD54BQ9Y620 910 aa12.25□□□□□ -0.45
RAB5C-204ENST00000547517 CCDC163A0A0D9SF12 145 aa12.24□□□□□ -0.45
RAB5C-204ENST00000547517 RPP40O75818 363 aaKnown RBP12.24□□□□□ -0.45
RAB5C-204ENST00000547517 PABPC1P11940 636 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms