RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 GRIA2P42262 883 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 SLC6A11P48066 632 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 ZNF143P52747 638 aaPredicted RBP17.43■□□□□ 0.38
CCDC38-203ENST00000546803 ATP11AP98196 1134 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 PIK3R6Q5UE93 754 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 NAIF1Q69YI7 327 aaPredicted RBP17.43■□□□□ 0.38
CCDC38-203ENST00000546803 NADSYN1Q6IA69 706 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 NUDT18Q6ZVK8 323 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 C12orf40Q86WS4 652 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 NAT16Q8N8M0 369 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 CENPIQ92674 756 aaPredicted RBP17.43■□□□□ 0.38
CCDC38-203ENST00000546803 CHP1Q99653 195 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 SLC2A11Q9BYW1 496 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 NHEJ1Q9H9Q4 299 aaPredicted RBP17.43■□□□□ 0.38
CCDC38-203ENST00000546803 FBRSL1Q9HCM7 1045 aaKnown RBP17.43■□□□□ 0.38
CCDC38-203ENST00000546803 ARHGEF4Q9NR80 690 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 DNAJC17Q9NVM6 304 aaKnown RBP17.43■□□□□ 0.38
CCDC38-203ENST00000546803 DLGAP2Q9P1A6 1054 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 CALCOCO1Q9P1Z2 691 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 FBXO10Q9UK96 956 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 COL4A2P08572 1712 aa17.43■□□□□ 0.38
CCDC38-203ENST00000546803 HELZP42694 1942 aaKnown RBP17.43■□□□□ 0.38
CCDC38-203ENST00000546803 GOLGA6L7A0A1B0GV03 622 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 TYW5A2RUC4 315 aaKnown RBP17.42■□□□□ 0.38
CCDC38-203ENST00000546803 APODP05090 189 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 SLC6A4P31645 630 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 RPL7AP62424 266 aaKnown RBP17.42■□□□□ 0.38
CCDC38-203ENST00000546803 GFPT1Q06210 699 aaPredicted RBP17.42■□□□□ 0.38
CCDC38-203ENST00000546803 MS4A13Q5J8X5 152 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 GRAMD4Q6IC98 578 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.42■□□□□ 0.38
CCDC38-203ENST00000546803 CHSY1Q86X52 802 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 DNAAF5Q86Y56 855 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 ZNF557Q8N988 423 aaPredicted RBP17.42■□□□□ 0.38
CCDC38-203ENST00000546803 HJURPQ8NCD3 748 aaPredicted RBP17.42■□□□□ 0.38
CCDC38-203ENST00000546803 FNIP1Q8TF40 1166 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 BHMTQ93088 406 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 PANX2Q96RD6 677 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 CNPY3Q9BT09 278 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 TKTL2Q9H0I9 626 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 CHRDQ9H2X0 955 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 PLK2Q9NYY3 685 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 IMPACTQ9P2X3 320 aa17.42■□□□□ 0.38
CCDC38-203ENST00000546803 XPO7Q9UIA9 1087 aaKnown RBP17.42■□□□□ 0.38
CCDC38-203ENST00000546803 TMEM191CA6NGB0 347 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 F5H5T6 163 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 ATMINO43313 823 aaPredicted RBP17.41■□□□□ 0.38
CCDC38-203ENST00000546803 TSPAN3O60637 253 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 PAGE1O75459 146 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 KAT7O95251 611 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 EGFP01133 1207 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 TACR2P21452 398 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 CDO1Q16878 200 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 C15orf59Q2T9L4 293 aaPredicted RBP17.41■□□□□ 0.38
CCDC38-203ENST00000546803 ARL13BQ3SXY8 428 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 RAP1GAP2Q684P5 730 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 RFWD3Q6PCD5 774 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 MAMSTRQ6ZN01 415 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 PHTF2Q8N3S3 785 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 DTWD2Q8NBA8 298 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 FAM172AQ8WUF8 416 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 HAPLN3Q96S86 360 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 PRMT1Q99873 361 aaKnown RBP17.41■□□□□ 0.38
CCDC38-203ENST00000546803 MYO1AQ9UBC5 1043 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 SLC27A6Q9Y2P4 619 aa17.41■□□□□ 0.38
CCDC38-203ENST00000546803 CYP1A2P05177 515 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 H2AFZP0C0S5 128 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 CISD3P0C7P0 127 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 HOXD9P28356 352 aaPredicted RBP17.4■□□□□ 0.38
CCDC38-203ENST00000546803 TNFRSF4P43489 277 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 DGKGP49619 791 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 ATXN1P54253 815 aaKnown RBP17.4■□□□□ 0.38
CCDC38-203ENST00000546803 GALCP54803 685 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 HDAC4P56524 1084 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 AUHQ13825 339 aaKnown RBP17.4■□□□□ 0.38
CCDC38-203ENST00000546803 TTC39BQ5VTQ0 682 aaPredicted RBP17.4■□□□□ 0.38
CCDC38-203ENST00000546803 RNF43Q68DV7 783 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 H2AFVQ71UI9 128 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 FAM131BQ86XD5 332 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 LGI2Q8N0V4 545 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 TERB1Q8NA31 727 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 P2RY11Q96G91 374 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 C1orf74Q96LT6 269 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 PRICKLE1Q96MT3 831 aaPredicted RBP17.4■□□□□ 0.38
CCDC38-203ENST00000546803 PRRX2Q99811 253 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 NCAPGQ9BPX3 1015 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 THAP2Q9H0W7 228 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 RBM12Q9NTZ6 932 aaKnown RBP17.4■□□□□ 0.38
CCDC38-203ENST00000546803 HS3ST4Q9Y661 456 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 MUC3AQ02505 3323 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 CUL9Q8IWT3 2517 aa17.4■□□□□ 0.38
CCDC38-203ENST00000546803 TICRRQ7Z2Z1 1910 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 TBC1D3BA6NDS4 549 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 GOLGA6L6A8MZA4 724 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 CCP110O43303 1012 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 TBL1XO60907 577 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 ATG13O75143 517 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 FECHP22830 423 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 PSMA2P25787 234 aa17.39■□□□□ 0.37
CCDC38-203ENST00000546803 ADRA1BP35368 520 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms