RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ZNF334Q9HCZ1 680 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 ABHD10Q9NUJ1 306 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 HCFC1R1Q9NWW0 138 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 EHD2Q9NZN4 543 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CAPN11Q9UMQ6 739 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 LUC7L2Q9Y383 392 aaKnown RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 USP15Q9Y4E8 981 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 HHLA1C9JL84 531 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 MBTPS2O43462 519 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 RTN3O95197 1032 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 MMEP08473 750 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 ADH5P11766 374 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 DRD2P14416 443 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 HMGA1P17096 107 aaKnown RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 MAP4P27816 1152 aaKnown RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 GABRR2P28476 465 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 CDC25CP30307 473 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 PRKCIP41743 596 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 MTHFRP42898 656 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 GPD2P43304 727 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 RGS7P49802 495 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 NOMO3P69849 1222 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 NTHL1P78549 312 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 FMO1Q01740 532 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 GOLGA8FQ08AF8 430 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 GOLGA8DPQ0D2H9 430 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 KLHL30Q0D2K2 578 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 TBX2Q13207 712 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 SLC5A9Q2M3M2 681 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 RAB41Q5JT25 222 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 CYP4A22Q5TCH4 519 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 TMCO4Q5TGY1 634 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 NAA35Q5VZE5 725 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 TRIM72Q6ZMU5 477 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 PDZD4Q76G19 769 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 GET4Q7L5D6 327 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 DNAJB7Q7Z6W7 309 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 ZDHHC13Q8IUH4 622 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 NUP93Q8N1F7 819 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 SIX6OS1Q8N1H7 587 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 SCAMP5Q8TAC9 235 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 OLIG1Q8TAK6 271 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 SHKBP1Q8TBC3 707 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 UBA3Q8TBC4 463 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 IPO4Q8TEX9 1081 aaKnown RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 FBXO32Q969P5 355 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 ZNF512Q96ME7 567 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 NOX5Q96PH1 765 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 SLITRK1Q96PX8 696 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 SYT11Q9BT88 431 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 LHX5Q9H2C1 402 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 POMKQ9H5K3 350 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 LRRC4Q9HBW1 653 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 WDR6Q9NNW5 1121 aaKnown RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 ST7Q9NRC1 585 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 SEPT11Q9NVA2 429 aaKnown RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 AIPL1Q9NZN9 384 aa6.65□□□□□ -1.34
PRKDC-211ENST00000546304 DNMT3BQ9UBC3 853 aaKnown RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 UXTQ9UBK9 157 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 MAGED2Q9UNF1 606 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-211ENST00000546304 NCANO14594 1321 aa6.65□□□□□ -1.35
PRKDC-211ENST00000546304 COL4A3Q01955 1670 aa6.65□□□□□ -1.35
PRKDC-211ENST00000546304 FAM170AA1A519 330 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 FAM92AA1XBS5 289 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 GOLGA6L6A8MZA4 724 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 AKR1B15C9JRZ8 316 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-211ENST00000546304 E5RJQ4 531 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 FGF19O95750 216 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 SERPING1P05155 500 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 MYL4P12829 197 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 CEBPBP17676 345 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 PTPN2P17706 415 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 CHRNB2P17787 502 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 YWHAQP27348 245 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 HNRNPH3P31942 346 aaKnown RBP6.64□□□□□ -1.35
PRKDC-211ENST00000546304 CDH5P33151 784 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-211ENST00000546304 CCR2P41597 374 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 MRE11P49959 708 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 TKTL1P51854 596 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 KIF11P52732 1056 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 ADKP55263 362 aaKnown RBP6.64□□□□□ -1.35
PRKDC-211ENST00000546304 CYP4F8P98187 520 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 TAF10Q12962 218 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 SMAD2Q15796 467 aaKnown RBP6.64□□□□□ -1.35
PRKDC-211ENST00000546304 AAK1Q2M2I8 961 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 PTPN20Q4JDL3 420 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 ATAT1Q5SQI0 421 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 PMF1Q6P1K2 205 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 GAREM2Q75VX8 874 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 CCDC186Q7Z3E2 898 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 ZNF571Q7Z3V5 609 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-211ENST00000546304 IRF2BP2Q7Z5L9 587 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 VPS36Q86VN1 386 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 DRC7Q8IY82 874 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 TC2NQ8N9U0 490 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 SPC24Q8NBT2 197 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 TMEM35BQ8NCS4 154 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 MSANTD4Q8NCY6 345 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms