RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 KCNT1Q5JUK3 1230 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 BRMS1LQ5PSV4 323 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 RAP1GAP2Q684P5 730 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 SCYL2Q6P3W7 929 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 RHBDF2Q6PJF5 856 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 REXO1L1PQ8IX06 675 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 ZNF683Q8IZ20 524 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 LRRC57Q8N9N7 239 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 BHMTQ93088 406 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 RNF34Q969K3 372 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 NXPE3Q969Y0 559 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 BTN2A3PQ96KV6 586 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 IRX2Q9BZI1 471 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-217ENST00000545738 LZTFL1Q9NQ48 299 aa16.88■□□□□ 0.29
LIMS2-217ENST00000545738 MIA3Q5JRA6 1907 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 APOEP02649 317 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 MESP2Q0VG99 397 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 KIF5AQ12840 1032 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 LY6G5CQ5SRR4 150 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 ADGRF1Q5T601 910 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 CC2D1AQ6P1N0 951 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-217ENST00000545738 TPGS1Q6ZTW0 290 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 UNC45BQ8IWX7 931 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 SNRNP25Q9BV90 132 aaKnown RBP16.87■□□□□ 0.29
LIMS2-217ENST00000545738 LUC7LQ9NQ29 371 aaKnown RBP16.87■□□□□ 0.29
LIMS2-217ENST00000545738 LSM7Q9UK45 103 aaKnown RBP16.87■□□□□ 0.29
LIMS2-217ENST00000545738 FZD10Q9ULW2 581 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 CLEC4EQ9ULY5 219 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 USP18Q9UMW8 372 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 DOCK4Q8N1I0 1966 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 TSPAN3O60637 253 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 COMTP21964 271 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 PCK1P35558 622 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 DHCR24Q15392 516 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 ARHGAP29Q52LW3 1261 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 C12orf40Q86WS4 652 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 C17orf53Q8N3J3 647 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-217ENST00000545738 IGSF8Q969P0 613 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 AZIN2Q96A70 460 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 NTAN1Q96AB6 310 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 UHRF1Q96T88 793 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-217ENST00000545738 DCLK3Q9C098 648 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 SIK2Q9H0K1 926 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 BRD9Q9H8M2 597 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 ECT2Q9H8V3 914 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 PLK2Q9NYY3 685 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 GUCA1BQ9UMX6 200 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 DUSP12Q9UNI6 340 aa16.87■□□□□ 0.29
LIMS2-217ENST00000545738 MAN1A1P33908 653 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 IFNAR2P48551 515 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 RPS24P62847 133 aaKnown RBP16.86■□□□□ 0.29
LIMS2-217ENST00000545738 SCAPQ12770 1279 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 AUHQ13825 339 aaKnown RBP16.86■□□□□ 0.29
LIMS2-217ENST00000545738 FYB2Q5VWT5 728 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 FBXL22Q6P050 247 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 ZNF662Q6ZS27 426 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 CIR1Q86X95 450 aaPredicted RBP16.86■□□□□ 0.29
LIMS2-217ENST00000545738 YAF2Q8IY57 180 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 CFAP52Q8N1V2 620 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 KIAA1958Q8N8K9 716 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 SPHK2Q9NRA0 654 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 HEBP1Q9NRV9 189 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 KLHL11Q9NVR0 708 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 TRMT1Q9NXH9 659 aaKnown RBP16.86■□□□□ 0.29
LIMS2-217ENST00000545738 TBC1D14Q9P2M4 693 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 SORCS3Q9UPU3 1222 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 ALG6Q9Y672 507 aa16.86■□□□□ 0.29
LIMS2-217ENST00000545738 KIAA1549LQ6ZVL6 1849 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 TRIM24O15164 1050 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 RNF8O76064 485 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 LATS1O95835 1130 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 SLC2A3P11169 496 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 SRFP11831 508 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 TACR2P21452 398 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 MARCKSL1P49006 195 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 SLC11A2P49281 568 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 MLLT6P55198 1093 aaPredicted RBP16.85■□□□□ 0.29
LIMS2-217ENST00000545738 SEMA3BQ13214 749 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 RUNX3Q13761 415 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 ACAP1Q15027 740 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 MANEALQ5VSG8 457 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 TXNDC11Q6PKC3 985 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 SND1Q7KZF4 910 aaKnown RBP eCLIP16.85■□□□□ 0.29
LIMS2-217ENST00000545738 SLFN11Q7Z7L1 901 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 CPXM2Q8N436 756 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 ATP6V0D2Q8N8Y2 350 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 WFDC5Q8TCV5 224 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 IRF7Q92985 503 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 ZWILCHQ9H900 591 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 SLC2A4RGQ9NR83 387 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 THG1LQ9NWX6 298 aaKnown RBP16.85■□□□□ 0.29
LIMS2-217ENST00000545738 VANGL2Q9ULK5 521 aa16.85■□□□□ 0.29
LIMS2-217ENST00000545738 ANTXRLA6NF34 631 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 NRDCO43847 1150 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 RARAP10276 462 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 PDGFRLQ15198 375 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 C11orf63Q6NUN7 778 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 CHSY1Q86X52 802 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 CD101Q93033 1021 aa16.84■□□□□ 0.29
LIMS2-217ENST00000545738 ATP2A3Q93084 1043 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms