RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 WNT6Q9Y6F9 365 aa8.1□□□□□ -1.11
SNHG1-223ENST00000545440 R4GN57 208 aa8.1□□□□□ -1.11
SNHG1-223ENST00000545440 GPR179Q6PRD1 2367 aa8.1□□□□□ -1.11
SNHG1-223ENST00000545440 ZNF292O60281 2723 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 PI4KAP42356 2102 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 PMM2O15305 246 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 COCHO43405 550 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 BEST1O76090 585 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 MBL2P11226 248 aaPredicted RBP8.09□□□□□ -1.11
SNHG1-223ENST00000545440 ESRRAP11474 423 aaPredicted RBP8.09□□□□□ -1.11
SNHG1-223ENST00000545440 CD58P19256 250 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 DRD1P21728 446 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 BMP6P22004 513 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 ADORA2BP29275 332 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 GJA4P35212 333 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 CXCL12P48061 93 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 MAP3K7CLP57077 242 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 YWHAEP62258 255 aaKnown RBP8.09□□□□□ -1.11
SNHG1-223ENST00000545440 ZXDBP98169 803 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 SATB1Q01826 763 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 GSTM4Q03013 218 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 GRSF1Q12849 480 aaKnown RBP eCLIP8.09□□□□□ -1.11
SNHG1-223ENST00000545440 PAK1Q13153 545 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 FBXO43Q4G163 708 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 HECTD3Q5T447 861 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 FSTL4Q6MZW2 842 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 Q6ZS52 159 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 VN1R5Q7Z5H4 357 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 DTWD1Q8N5C7 304 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 NELFBQ8WX92 580 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 ATRIPQ8WXE1 791 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 P2RY13Q9BPV8 354 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 RNF38Q9H0F5 515 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 EPC1Q9H2F5 836 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 TLR8Q9NR97 1041 aaKnown RBP8.09□□□□□ -1.11
SNHG1-223ENST00000545440 CISHQ9NSE2 258 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 RBM12Q9NTZ6 932 aaKnown RBP8.09□□□□□ -1.11
SNHG1-223ENST00000545440 CHMP5Q9NZZ3 219 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 GMIPQ9P107 970 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 CYP8B1Q9UNU6 501 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 CTNND2Q9UQB3 1225 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 SCML2Q9UQR0 700 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 CPQQ9Y646 472 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 CEP250Q9BV73 2442 aa8.09□□□□□ -1.11
SNHG1-223ENST00000545440 E2F8A0AVK6 867 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 HHLA1C9JL84 531 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 K7ESF4 209 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 P4HA2O15460 535 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 TLR5O60602 858 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 GNA14O95837 355 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 CYP17A1P05093 508 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 EPHA1P21709 976 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 NME2P22392 152 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 TBXAS1P24557 533 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-223ENST00000545440 HOXA6P31267 233 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 ANP32AP39687 249 aaKnown RBP8.08□□□□□ -1.12
SNHG1-223ENST00000545440 EIF2DP41214 584 aaKnown RBP8.08□□□□□ -1.12
SNHG1-223ENST00000545440 FMO5P49326 533 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 RAD23BP54727 409 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 RPS26P62854 115 aaKnown RBP8.08□□□□□ -1.12
SNHG1-223ENST00000545440 CUL2Q13617 745 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 CCDC40Q4G0X9 1142 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 ARHGAP17Q68EM7 881 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 KLHL10Q6JEL2 608 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 KLHDC10Q6PID8 442 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 TSSK4Q6SA08 328 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 GPRIN1Q7Z2K8 1008 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 CCDC186Q7Z3E2 898 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 FILIP1Q7Z7B0 1213 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 DMRTC2Q8IXT2 367 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-223ENST00000545440 SUMF1Q8NBK3 374 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 SLC4A11Q8NBS3 891 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 CD101Q93033 1021 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 OTUB2Q96DC9 234 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 TMEM176AQ96HP8 235 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 DUSP16Q9BY84 665 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 NACA2Q9H009 215 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 SMPD4Q9NXE4 827 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 NOP53Q9NZM5 478 aaKnown RBP8.08□□□□□ -1.12
SNHG1-223ENST00000545440 CFAP97Q9P2B7 532 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 TBC1D14Q9P2M4 693 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 MKL2Q9ULH7 1088 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 SDK1Q7Z5N4 2213 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 TP53BP1Q12888 1972 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-223ENST00000545440 ABCA7Q8IZY2 2146 aa8.08□□□□□ -1.12
SNHG1-223ENST00000545440 MUC22E2RYF6 1773 aaPredicted RBP8.07□□□□□ -1.12
SNHG1-223ENST00000545440 CHURC1-FNTBB4DL54 471 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 SHISA8B8ZZ34 492 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 BIN1O00499 593 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 CYP26A1O43174 497 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 ATG13O75143 517 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 EGFP01133 1207 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 ACO1P21399 889 aaKnown RBP8.07□□□□□ -1.12
SNHG1-223ENST00000545440 LIG3P49916 1009 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 KIF11P52732 1056 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 SLC8A3P57103 927 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 GOLGA8FQ08AF8 430 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 GOLGA8DPQ0D2H9 430 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 CETN1Q12798 172 aa8.07□□□□□ -1.12
SNHG1-223ENST00000545440 GAB4Q2WGN9 574 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms