RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC78-216ENST00000544996 COX16Q9P0S2 106 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 BCCIPQ9P287 314 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC78-216ENST00000544996 CLEC4EQ9ULY5 219 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 STAP1Q9ULZ2 295 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 TCRBV21S2A2A0A5A6 115 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 KCNU1A8MYU2 1149 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 GOLGA6L19H0YKK7 550 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 TEX33O43247 280 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 TBL1XO60907 577 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 HNRNPLP14866 589 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCDC78-216ENST00000544996 SLC6A4P31645 630 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 MATKP42679 507 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 WASP42768 502 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 NOMO3P69849 1222 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 PITX1P78337 314 aaPredicted RBP16.31■□□□□ 0.2
CCDC78-216ENST00000544996 NME3Q13232 169 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 ZSCAN23Q3MJ62 389 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 MS4A13Q5J8X5 152 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 NADSYN1Q6IA69 706 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.31■□□□□ 0.2
CCDC78-216ENST00000544996 RASSF3Q86WH2 238 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 XYLT1Q86Y38 959 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 PGBD3Q8N328 593 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 WFIKKN2Q8TEU8 576 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 CIPCQ9C0C6 399 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 CBX8Q9HC52 389 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 ELOVL2Q9NXB9 296 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 HCN2Q9UL51 889 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 MYO15AQ9UKN7 3530 aa16.31■□□□□ 0.2
CCDC78-216ENST00000544996 MYOFQ9NZM1 2061 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 M0QYT0 321 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 CYP1A1P04798 512 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-216ENST00000544996 FERP16591 822 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 CHRNB2P17787 502 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 HLA-FP30511 346 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 SGSHP51688 502 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 FMO1Q01740 532 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 EIF4EBP2Q13542 120 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-216ENST00000544996 SND1Q7KZF4 910 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCDC78-216ENST00000544996 LUZP1Q86V48 1076 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 C11orf74Q86VG3 221 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 CHSY1Q86X52 802 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 MFN1Q8IWA4 741 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 GPR161Q8N6U8 529 aaKnown RBP16.3■□□□□ 0.2
CCDC78-216ENST00000544996 MDGA1Q8NFP4 955 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 HMGB4Q8WW32 186 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 ACOX2Q99424 681 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 GABRG3Q99928 467 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 NUCKS1Q9H1E3 243 aaKnown RBP16.3■□□□□ 0.2
CCDC78-216ENST00000544996 ABCB8Q9NUT2 735 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 CACNA2D2Q9NY47 1150 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 STIM2Q9P246 746 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 MYO6Q9UM54 1294 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 PAXBP1Q9Y5B6 917 aa16.3■□□□□ 0.2
CCDC78-216ENST00000544996 KIAA1549LQ6ZVL6 1849 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 A0A1B0GTH6 734 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 A0A1W2PQC6 194 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 FAM170AA1A519 330 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 F5H5T6 163 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 GOLGA8SH3BPF8 625 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 F9P00740 461 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 RETP07949 1114 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 TACR2P21452 398 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 MMP8P22894 467 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 NSFP46459 744 aaKnown RBP16.29■□□□□ 0.2
CCDC78-216ENST00000544996 RPS24P62847 133 aaKnown RBP16.29■□□□□ 0.2
CCDC78-216ENST00000544996 CDH18Q13634 790 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 BYSLQ13895 437 aaKnown RBP16.29■□□□□ 0.2
CCDC78-216ENST00000544996 STARD3Q14849 445 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 C2CD6Q53TS8 623 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 RAP1GAP2Q684P5 730 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 MMS22LQ6ZRQ5 1243 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 CHST9Q7L1S5 443 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 LGI2Q8N0V4 545 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 AHI1Q8N157 1196 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 FAM160A2Q8N612 972 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-216ENST00000544996 NAP1L5Q96NT1 182 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-216ENST00000544996 NPY6RQ99463 290 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 TPSD1Q9BZJ3 242 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 SEPT11Q9NVA2 429 aaKnown RBP16.29■□□□□ 0.2
CCDC78-216ENST00000544996 THAP10Q9P2Z0 257 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-216ENST00000544996 XPO7Q9UIA9 1087 aaKnown RBP16.29■□□□□ 0.2
CCDC78-216ENST00000544996 GGA2Q9UJY4 613 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 PLA2G4CQ9UP65 541 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 STON1Q9Y6Q2 735 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 FANCMQ8IYD8 2048 aa16.29■□□□□ 0.2
CCDC78-216ENST00000544996 SYNCRIPO60506 623 aaKnown RBP16.28■□□□□ 0.2
CCDC78-216ENST00000544996 ATP5BP06576 529 aaKnown RBP16.28■□□□□ 0.2
CCDC78-216ENST00000544996 PABPC1P11940 636 aaKnown RBP16.28■□□□□ 0.2
CCDC78-216ENST00000544996 SULT1E1P49888 294 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 NR1I3Q14994 352 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 ELF2Q15723 593 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 SLC25A52Q3SY17 297 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 RNF43Q68DV7 783 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 ARCQ7LC44 396 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 KBTBD6Q86V97 674 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 CFAP52Q8N1V2 620 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 CARNMT1Q8N4J0 409 aa16.28■□□□□ 0.2
CCDC78-216ENST00000544996 DCLK2Q8N568 766 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms