RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 C6orf222P0C671 652 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 SMIM10L2AP0DMW4 78 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SMIM10L2BP0DMW5 78 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 CPA3P15088 417 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 HADHAP40939 763 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 TRPC1P48995 793 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 YWHAZP63104 245 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 MRPS15P82914 257 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 ZNF235Q14590 738 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 MAPRE1Q15691 268 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 PCSK7Q16549 785 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SWT1Q5T5J6 900 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 ANKRD22Q5VYY1 191 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 CDCA2Q69YH5 1023 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 LCLAT1Q6UWP7 414 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 FRA10AC1Q70Z53 315 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 OTOAQ7RTW8 1153 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 TMPRSS6Q8IU80 811 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 KIRREL3Q8IZU9 778 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 ATP6V1E2Q96A05 226 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 TSPAN18Q96SJ8 248 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 LBHD1Q9BQE6 289 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 CEP41Q9BYV8 373 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 OSBPL7Q9BZF2 842 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 UBE2OQ9C0C9 1292 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 ILKAPQ9H0C8 392 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 POPDC2Q9HBU9 364 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 GID8Q9NWU2 228 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 RRN3Q9NYV6 651 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 DLGAP2Q9P1A6 1054 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 RABGEF1Q9UJ41 708 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 DSEQ9UL01 958 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 GSTA4O15217 222 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 AVILO75366 819 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SRP72O76094 671 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 RECQL4O94761 1208 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 HOXC6P09630 235 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 GP5P40197 560 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 HSPA13P48723 471 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 NPY2RP49146 381 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 CACNB2Q08289 660 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 IQSEC1Q6DN90 963 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 ARHGAP22Q7Z5H3 698 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 DCP1BQ8IZD4 617 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 SYT15Q9BQS2 421 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 MRPL1Q9BYD6 325 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 ING2Q9H160 280 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 PCDH18Q9HCL0 1135 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 PDGFCQ9NRA1 345 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 MRGBPQ9NV56 204 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SLC17A7Q9P2U7 560 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 FETUBQ9UGM5 382 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 MCM8Q9UJA3 840 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 L3MBTL1Q9Y468 752 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 MYH7BA7E2Y1 1941 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 A0A0G2JLL6 359 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 MEI4A8MW99 385 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 C2CD2LO14523 706 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 AIM2O14862 343 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 BIRC5O15392 142 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 CD48P09326 243 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 PPARGP37231 505 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 PSEN2P49810 448 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 ERFP50548 548 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SLC34A1Q06495 639 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 HSDL1Q3SXM5 330 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 PRRT2Q7Z6L0 340 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 KCNMB4Q86W47 210 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 C1orf127Q8N9H9 656 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 ANKRD52Q8NB46 1076 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SLC44A1Q8WWI5 657 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 TMA16Q96EY4 203 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 SMARCD1Q96GM5 515 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SYT11Q9BT88 431 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 FICDQ9BVA6 458 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 LRMDAQ9H2I8 198 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 TRHDEQ9UKU6 1024 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 ZC3H4Q9UPT8 1303 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 FAM237BA0A1B0GVD1 139 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 BCLAF3A2AJT9 711 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 TSPAN1O60635 241 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 LGR5O75473 907 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 THP07101 528 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ACAT1P24752 427 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 SERPINB5P36952 375 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 GDF10P55107 478 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 SLC12A1Q13621 1099 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TRMT5Q32P41 509 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 SH3D19Q5HYK7 790 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 C9orf57Q5W0N0 161 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 OLFML2BQ68BL8 750 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 LRRC8EQ6NSJ5 796 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TLK2Q86UE8 772 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ECHDC2Q86YB7 292 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 C12orf29Q8N999 325 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 RFWD2Q8NHY2 731 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 KCTD15Q96SI1 283 aaPredicted RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 TBL1YQ9BQ87 522 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TXLNGYQ9BZA5 131 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 CACYBPQ9HB71 228 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms