RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 RPL6Q02878 288 aaKnown RBP13.67□□□□□ -0.22
CIT-214ENST00000544588 ZNF234Q14588 700 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 EIF4HQ15056 248 aaKnown RBP13.67□□□□□ -0.22
CIT-214ENST00000544588 FNDC3BQ53EP0 1204 aaKnown RBP13.67□□□□□ -0.22
CIT-214ENST00000544588 ZC3H12AQ5D1E8 599 aaKnown RBP13.67□□□□□ -0.22
CIT-214ENST00000544588 EFHC1Q5JVL4 640 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 FKBP15Q5T1M5 1219 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 PIK3R6Q5UE93 754 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 TAF3Q5VWG9 929 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 NADSYN1Q6IA69 706 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 SERPINA13PQ6UXR4 307 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 C11orf57Q6ZUT1 292 aaPredicted RBP13.67□□□□□ -0.22
CIT-214ENST00000544588 MFN1Q8IWA4 741 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 DEFB106AQ8N104 65 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 CARNMT1Q8N4J0 409 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 ANKRD20A12PQ8NF67 263 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 CYB5D2Q8WUJ1 264 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 FCRL2Q96LA5 508 aaPredicted RBP13.67□□□□□ -0.22
CIT-214ENST00000544588 LHX5Q9H2C1 402 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 RXFP3Q9NSD7 469 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 FANCLQ9NW38 375 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 STOML2Q9UJZ1 356 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 PCDHGC3Q9UN70 934 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 OBSL1O75147 1896 aa13.67□□□□□ -0.22
CIT-214ENST00000544588 SDK1Q7Z5N4 2213 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 KHNYNO15037 678 aaKnown RBP13.66□□□□□ -0.22
CIT-214ENST00000544588 NPC1O15118 1278 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 IRAK2O43187 625 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 NDUFS2O75306 463 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 IGLV3-27P01718 113 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 PABPC1P11940 636 aaKnown RBP13.66□□□□□ -0.22
CIT-214ENST00000544588 UCHL3P15374 230 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 HLA-FP30511 346 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 PTGER3P43115 390 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 FOXK2Q01167 660 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 NME3Q13232 169 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 FUT11Q495W5 492 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 FAM133BQ5BKY9 247 aaKnown RBP13.66□□□□□ -0.22
CIT-214ENST00000544588 PLA2G2CQ5R387 149 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 LYSMD4Q5XG99 296 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 RAP1GAP2Q684P5 730 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 TMEM215Q68D42 235 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 MBLAC2Q68D91 279 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 SLC36A4Q6YBV0 504 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 FAM183BPQ6ZVS7 135 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 CHSY1Q86X52 802 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 CACUL1Q86Y37 369 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 FAM71AQ8IYT1 594 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 LGI2Q8N0V4 545 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 CFAP52Q8N1V2 620 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 HJURPQ8NCD3 748 aaPredicted RBP13.66□□□□□ -0.22
CIT-214ENST00000544588 TMEM35BQ8NCS4 154 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 WFIKKN2Q8TEU8 576 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 AZIN2Q96A70 460 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 MRGPRX1Q96LB2 322 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 NUCKS1Q9H1E3 243 aaKnown RBP13.66□□□□□ -0.22
CIT-214ENST00000544588 DDIT4Q9NX09 232 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 XPO7Q9UIA9 1087 aaKnown RBP13.66□□□□□ -0.22
CIT-214ENST00000544588 GGA2Q9UJY4 613 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 DENND4CQ5VZ89 1909 aa13.66□□□□□ -0.22
CIT-214ENST00000544588 ATG2BQ96BY7 2078 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 H0Y626 953 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 SLC30A4O14863 429 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 AP5Z1O43299 807 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 MBD3O95983 291 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 ERBB2P04626 1255 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 ATP5BP06576 529 aaKnown RBP13.65□□□□□ -0.22
CIT-214ENST00000544588 ACADMP11310 421 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 HLA-EP13747 358 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 CYP11B1P15538 503 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 POLR2EP19388 210 aaKnown RBP13.65□□□□□ -0.22
CIT-214ENST00000544588 ABCB4P21439 1286 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 CD70P32970 193 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 KLK7P49862 253 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 RPS24P62847 133 aaKnown RBP13.65□□□□□ -0.22
CIT-214ENST00000544588 PITX1P78337 314 aaPredicted RBP13.65□□□□□ -0.22
CIT-214ENST00000544588 NNTQ13423 1086 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 CDH18Q13634 790 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 KRT31Q15323 416 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 STX1AQ16623 288 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 MS4A13Q5J8X5 152 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 CCDC183Q5T5S1 534 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 RNF43Q68DV7 783 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 BEND5Q7L4P6 421 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 TMPRSS6Q8IU80 811 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 AHI1Q8N157 1196 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 ZNF366Q8N895 744 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 ATP6V0D2Q8N8Y2 350 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 PRCCQ92733 491 aaPredicted RBP13.65□□□□□ -0.22
CIT-214ENST00000544588 SIPA1Q96FS4 1042 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 SLC39A13Q96H72 371 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 STK33Q9BYT3 514 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 PRDM16Q9HAZ2 1276 aa13.65□□□□□ -0.22
CIT-214ENST00000544588 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.65□□□□□ -0.22
CIT-214ENST00000544588 KIF26AQ9ULI4 1882 aaPredicted RBP13.65□□□□□ -0.22
CIT-214ENST00000544588 ATXN2Q99700 1313 aaKnown RBP13.64□□□□□ -0.23
CIT-214ENST00000544588 IGHV1OR15-9A0A0B4J2B8 117 aa13.64□□□□□ -0.23
CIT-214ENST00000544588 PATE3B3GLJ2 98 aa13.64□□□□□ -0.23
CIT-214ENST00000544588 HSF2BPO75031 334 aa13.64□□□□□ -0.23
CIT-214ENST00000544588 GLI1P08151 1106 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms