RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 DDX43Q9NXZ2 648 aaKnown RBP16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 ZWINTO95229 277 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 APOEP02649 317 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 C1QAP02745 245 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 ENO1P06733 434 aaKnown RBP16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 ALDH3A1P30838 453 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 SLC8A1P32418 973 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 PSEN2P49810 448 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 ALDH18A1P54886 795 aaKnown RBP16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 SLC45A4Q5BKX6 768 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 OTUD1Q5VV17 481 aaPredicted RBP16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 BZW1Q7L1Q6 419 aaKnown RBP16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 IFNLR1Q8IU57 520 aaPredicted RBP16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 SHCBP1Q8NEM2 672 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 RNF139Q8WU17 664 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 APOPT1Q96IL0 206 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 TMEM209Q96SK2 561 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 DHRS4Q9BTZ2 278 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 PPME1Q9Y570 386 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 MEI4A8MW99 385 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 TROVE2P10155 538 aaKnown RBP eCLIP16.26■□□□□ 0.192e-11■□□□□ 9.4
SNRNP70-203ENST00000544278 DEUP1Q05D60 604 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 GRIK3Q13003 919 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 GRB14Q14449 540 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 PDK2Q15119 407 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 DCAF4L1Q3SXM0 396 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 SDHAF4Q5VUM1 108 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 DSTYKQ6XUX3 929 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 ASRGL1Q7L266 308 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 CLNKQ7Z7G1 428 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 TNS4Q8IZW8 715 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 FAM13CQ8NE31 585 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 ATXN3LQ9H3M9 355 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 PPARGC1AQ9UBK2 798 aaKnown RBP16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 GLTPD2A6NH11 291 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 RFPL1O75677 317 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 IL31Q6EBC2 164 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 PPP1R14CQ8TAE6 165 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 TRIM55Q9BYV6 548 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 VPS11Q9H270 941 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 CRTAC1Q9NQ79 661 aa16.26■□□□□ 0.19
SNRNP70-203ENST00000544278 PRRC2BQ5JSZ5 2229 aaKnown RBP16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 CHADO15335 359 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 ITM2AO43736 263 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 PTPN1P18031 435 aaKnown RBP16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 ETV4P43268 484 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 TRIM32Q13049 653 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 VWA5B1Q5TIE3 1220 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 CLEC20AQ6ZU45 233 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 CEP128Q6ZU80 1094 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 ZNF410Q86VK4 478 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 ACVR1CQ8NER5 493 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 RILPQ96NA2 401 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 AGAP2Q99490 1192 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 KCNK13Q9HB14 408 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 KLHL8Q9P2G9 620 aaPredicted RBP16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 PACSIN3Q9UKS6 424 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 PIRO00625 290 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 SNRPAP09012 282 aaKnown RBP16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 OR4Q2P0C623 313 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 HUNKP57058 714 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 GNASQ5JWF2 1037 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 ATG14Q6ZNE5 492 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 NUDCD3Q8IVD9 361 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 SPATA6LQ8N4H0 392 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 SLC25A41Q8N5S1 370 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 POU5F2Q8N7G0 328 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 TFB1MQ8WVM0 346 aaKnown RBP16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 ATP2A3Q93084 1043 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 RNF34Q969K3 372 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 OXCT2Q9BYC2 517 aaPredicted RBP16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 DDIT4Q9NX09 232 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 SENP1Q9P0U3 644 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 SHROOM3Q8TF72 1996 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 PLXNA1Q9UIW2 1896 aa16.25■□□□□ 0.19
SNRNP70-203ENST00000544278 PGFP49763 221 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 TAF1CQ15572 869 aaPredicted RBP16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 SLC26A9Q7LBE3 791 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 NPWQ8N729 165 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 DNAAF3Q8N9W5 541 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 SENP8Q96LD8 212 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 ZNF778Q96MU6 729 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 SH3GL3Q99963 347 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 STRNO43815 780 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 DNAJC6O75061 913 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 F2P00734 622 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 NEK3P51956 506 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 UBAP2LQ14157 1087 aaKnown RBP16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 CERCAMQ5T4B2 595 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 TTC39BQ5VTQ0 682 aaPredicted RBP16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 ZNF567Q8N184 647 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 SCAMP5Q8TAC9 235 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 EBNA1BP2Q99848 306 aaKnown RBP16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 ZNF670Q9BS34 389 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 ARHGAP39Q9C0H5 1083 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 TPP1O14773 563 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 KRT37O76014 449 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 HAUS5O94927 633 aa16.24■□□□□ 0.19
SNRNP70-203ENST00000544278 MOCS2O96007 188 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms