RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 FAM83CQ9BQN1 747 aa10.99□□□□□ -0.65
DDX11-225ENST00000543511 DDX23Q9BUQ8 820 aaKnown RBP10.99□□□□□ -0.65
DDX11-225ENST00000543511 PACSIN1Q9BY11 444 aa10.99□□□□□ -0.65
DDX11-225ENST00000543511 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.99□□□□□ -0.65
DDX11-225ENST00000543511 CNOT8Q9UFF9 292 aaKnown RBP10.99□□□□□ -0.65
DDX11-225ENST00000543511 MUTYHQ9UIF7 546 aa10.99□□□□□ -0.65
DDX11-225ENST00000543511 HBS1LQ9Y450 684 aaKnown RBP10.99□□□□□ -0.65
DDX11-225ENST00000543511 DOCK4Q8N1I0 1966 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 C2CD4BA6NLJ0 364 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 SIGLEC16A6NMB1 481 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 CAPN9O14815 690 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 SCAMP3O14828 347 aaKnown RBP10.98□□□□□ -0.65
DDX11-225ENST00000543511 CHADO15335 359 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 AKR1B10O60218 316 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 LCA5LO95447 670 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 TRUB2O95900 331 aaKnown RBP10.98□□□□□ -0.65
DDX11-225ENST00000543511 KLKB1P03952 638 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 HMBSP08397 361 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 MYBL1P10243 752 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 SRFP11831 508 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 GDI1P31150 447 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 NOS2P35228 1153 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 GALCP54803 685 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 RNASE9P60153 205 aaKnown RBP10.98□□□□□ -0.65
DDX11-225ENST00000543511 RPL7AP62424 266 aaKnown RBP10.98□□□□□ -0.65
DDX11-225ENST00000543511 GPC5P78333 572 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 COG7P83436 770 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 OGDHQ02218 1023 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 MAMLD1Q13495 774 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 ARHGAP29Q52LW3 1261 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 C16orf46Q6P387 395 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 RAD9BQ6WBX8 426 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 HTR3DQ70Z44 454 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 KDF1Q8NAX2 398 aaPredicted RBP10.98□□□□□ -0.65
DDX11-225ENST00000543511 OSCP1Q8WVF1 389 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 ARHGEF26Q96DR7 871 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 TRIM11Q96F44 468 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 ZFYVE19Q96K21 471 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 CFAP57Q96MR6 1250 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 SERPINB11Q96P15 392 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 MCEEQ96PE7 176 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 TBCBQ99426 244 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 SELENOOQ9BVL4 669 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 TRMT61BQ9BVS5 477 aaKnown RBP10.98□□□□□ -0.65
DDX11-225ENST00000543511 THAP2Q9H0W7 228 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 DEF6Q9H4E7 631 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 HPS4Q9NQG7 708 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 SLC2A4RGQ9NR83 387 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 RRN3Q9NYV6 651 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 TLR6Q9Y2C9 796 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 SH3BP1Q9Y3L3 701 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 HRH3Q9Y5N1 445 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 WNT6Q9Y6F9 365 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 F5P12259 2224 aa10.98□□□□□ -0.65
DDX11-225ENST00000543511 ANKRD62A6NC57 917 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 CYP1A2P05177 515 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 KRT3P12035 628 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 ARSAP15289 507 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 ABCB4P21439 1286 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 CORO1AP31146 461 aaKnown RBP10.97□□□□□ -0.65
DDX11-225ENST00000543511 RFC1P35251 1148 aaPredicted RBP10.97□□□□□ -0.65
DDX11-225ENST00000543511 PTPN9P43378 593 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 SULT1E1P49888 294 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 TBX4P57082 545 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 GSDMDP57764 484 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 RING1Q06587 406 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 TNK2Q07912 1038 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 ZNF252P-AS1Q0IIN9 211 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 SLC25A52Q3SY17 297 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 CCDC14Q49A88 953 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 RAB6CQ53S08 254 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 TRIM68Q6AZZ1 485 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 TMTC1Q8IUR5 882 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 BBS7Q8IWZ6 715 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 FAM217AQ8IXS0 508 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 CCDC170Q8IYT3 715 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 TTC16Q8NEE8 873 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 RXFP2Q8WXD0 754 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 PGAP3Q96FM1 320 aaPredicted RBP10.97□□□□□ -0.65
DDX11-225ENST00000543511 PDLIM2Q96JY6 352 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 COL25A1Q9BXS0 654 aaPredicted RBP10.97□□□□□ -0.65
DDX11-225ENST00000543511 TRIM7Q9C029 511 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 RAB6CQ9H0N0 254 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 LINC00597Q9H2U6 94 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 FAM204AQ9H8W3 233 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 TRPV5Q9NQA5 729 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 PIGVQ9NUD9 493 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 DDIT4Q9NX09 232 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 DUS2Q9NX74 493 aaKnown RBP10.97□□□□□ -0.65
DDX11-225ENST00000543511 KIAA1522Q9P206 1035 aaPredicted RBP10.97□□□□□ -0.65
DDX11-225ENST00000543511 STAP1Q9ULZ2 295 aa10.97□□□□□ -0.65
DDX11-225ENST00000543511 TMEM191CA6NGB0 347 aa10.96□□□□□ -0.65
DDX11-225ENST00000543511 OTOL1A6NHN0 477 aaPredicted RBP10.96□□□□□ -0.65
DDX11-225ENST00000543511 SHISA7A6NL88 538 aa10.96□□□□□ -0.65
DDX11-225ENST00000543511 GOLGA6L6A8MZA4 724 aa10.96□□□□□ -0.65
DDX11-225ENST00000543511 I6L893 689 aaPredicted RBP10.96□□□□□ -0.65
DDX11-225ENST00000543511 M0QYT0 321 aa10.96□□□□□ -0.65
DDX11-225ENST00000543511 GFRA2O00451 464 aa10.96□□□□□ -0.65
DDX11-225ENST00000543511 CDK2AP1O14519 115 aa10.96□□□□□ -0.65
DDX11-225ENST00000543511 CCP110O43303 1012 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms