RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 MSH3P20585 1137 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 GRM5P41594 1212 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 RTP1P59025 263 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 KRT72Q14CN4 511 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 IRAK1BP1Q5VVH5 260 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 C16orf59Q7L2K0 433 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 ZFPM2Q8WW38 1151 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 KAT2BQ92831 832 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 UBP1Q9NZI7 540 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 SEPT3Q9UH03 358 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 SH3BGRL2Q9UJC5 107 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 F8VP50 259 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 ZSCAN9O15535 394 aaPredicted RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 NDUFB5O43674 189 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 TSC22D2O75157 780 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 NDUFS2O75306 463 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 ARF4P18085 180 aaPredicted RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 SERPINA4P29622 427 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 EVX2Q03828 476 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 MAPK7Q13164 816 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 ITGB3BPQ13352 177 aaPredicted RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 TP53BP2Q13625 1128 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 ACOX1Q15067 660 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 CDKAL1Q5VV42 579 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 C1orf146Q5VVC0 180 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 DENND1BQ6P3S1 775 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 KIAA1324Q6UXG2 1013 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 TRMT11Q7Z4G4 463 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 C18orf25Q96B23 403 aaPredicted RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 TMEM159Q96B96 161 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 HSFY1Q96LI6 401 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 KLF6Q99612 283 aaPredicted RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 IER2Q9BTL4 223 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 PADI3Q9ULW8 664 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 RNF112Q9ULX5 631 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 SUFUQ9UMX1 484 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 B4GALT5O43286 388 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 LMNAP02545 664 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 NOS2P35228 1153 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 VSNL1P62760 191 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 SLC45A4Q5BKX6 768 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 ANO5Q75V66 913 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 FBXO22Q8NEZ5 403 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 STK32AQ8WU08 396 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 PACSIN1Q9BY11 444 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 SYTL2Q9HCH5 934 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 OSGEPQ9NPF4 335 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 COQ3Q9NZJ6 369 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 ZMYND8Q9ULU4 1186 aaPredicted RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 RWDD3Q9Y3V2 267 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 FAM32AQ9Y421 112 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 GMNCA6NCL1 334 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 TREHO43280 583 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 TRUB2O95900 331 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 FGFR1P11362 822 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 HSD3B2P26439 372 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 EEF1DP3Q658K8 133 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 WNT8BQ93098 351 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 FAM136AQ96C01 138 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 HSD17B14Q9BPX1 270 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 SEZ6LQ9BYH1 1024 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 EPC1Q9H2F5 836 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 NXF3Q9H4D5 531 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 MAN1C1Q9NR34 630 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 EVA1BQ9NVM1 165 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 TFR2Q9UP52 801 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 SLC27A5Q9Y2P5 690 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 DYRK1BQ9Y463 629 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 AP1M2Q9Y6Q5 423 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 FMN2Q9NZ56 1722 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 RPTORQ8N122 1335 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 TRIM49D1C9J1S8 452 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 GPR25O00155 361 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 TPPPO94811 219 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 ARIH2O95376 493 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 STMN1P16949 149 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 CDC25CP30307 473 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 CYP2C18P33260 490 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 SOAT1P35610 550 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 SMAD3P84022 425 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 PRKAA1Q13131 559 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 NAA30Q147X3 362 aaPredicted RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 CNGA2Q16280 664 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 ATAT1Q5SQI0 421 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 LRRC8EQ6NSJ5 796 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 NUP93Q8N1F7 819 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 LRRC52Q8N7C0 313 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 COLGALT1Q8NBJ5 622 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 MYLPFQ96A32 169 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 TMEM121Q9BTD3 319 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 STX18Q9P2W9 335 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 ZNF180Q9UJW8 692 aa7.07□□□□□ -1.28
SRGAP1-206ENST00000543397 A0A0A6YYK5 440 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 TCEA3O75764 348 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 SUPT7LO94864 414 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 RARGP13631 454 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 CTSEP14091 401 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 HALP42357 657 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms