RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ANLNQ9NQW6 1124 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 INTUQ9ULD6 942 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 EPN1Q9Y6I3 576 aaPredicted RBP17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 MYOFQ9NZM1 2061 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 EIF3CLB5ME19 914 aaKnown RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 NEDD8-MDP1E9PL57 170 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 I6L893 689 aaPredicted RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 TSPAN3O60637 253 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 PAGE1O75459 146 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 NDUFA10O95299 355 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 TYRP14679 529 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 MAGEA1P43355 309 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 GSE1Q14687 1217 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 SPA17Q15506 151 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 MS4A13Q5J8X5 152 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 PIK3R6Q5UE93 754 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 RAP1GAP2Q684P5 730 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 RFWD3Q6PCD5 774 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 RAD9BQ6WBX8 426 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 CHSY1Q86X52 802 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 ETFBKMTQ8IXQ9 262 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 FLCNQ8NFG4 579 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 CD101Q93033 1021 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 PBXIP1Q96AQ6 731 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 TMA16Q96EY4 203 aaKnown RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 P2RY11Q96G91 374 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 EIF3CQ99613 913 aaKnown RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 PRMT1Q99873 361 aaKnown RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 P2RY13Q9BPV8 354 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 LTB4R2Q9NPC1 389 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 C11orf16Q9NQ32 467 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 UVRAGQ9P2Y5 699 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 STK25O00506 426 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 CACNG3O60359 315 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 GPR37L1O60883 481 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 TACR2P21452 398 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 GALK1P51570 392 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 PON2Q15165 354 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 ARL13BQ3SXY8 428 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 TMEM196Q5HYL7 178 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 MPP7Q5T2T1 576 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 ACBD5Q5T8D3 534 aaPredicted RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 NAIF1Q69YI7 327 aaPredicted RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 CWF19L1Q69YN2 538 aaKnown RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 C12orf40Q86WS4 652 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 ZNF687Q8N1G0 1237 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 NAT16Q8N8M0 369 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 ZNF564Q8TBZ8 553 aaPredicted RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 DDI1Q8WTU0 396 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 BHMTQ93088 406 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 PRICKLE1Q96MT3 831 aaPredicted RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 XPO6Q96QU8 1125 aaKnown RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 HAPLN3Q96S86 360 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 C1QTNF1Q9BXJ1 281 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 OSBPL6Q9BZF3 934 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 FOXQ1Q9C009 403 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 LUC7LQ9NQ29 371 aaKnown RBP17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 PLK2Q9NYY3 685 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 CTTNBP2NLQ9P2B4 639 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 ANAPC7Q9UJX3 599 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 HS3ST4Q9Y661 456 aa17.72■□□□□ 0.43
RABGGTA-203ENST00000543002 FAM86C2PA6NEL3 165 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 FAM170BA6NMN3 283 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 F5H5T6 163 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 TULP3O75386 442 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 RNF8O76064 485 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 IPO7O95373 1038 aaKnown RBP17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 TARSP26639 723 aaKnown RBP17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 ADRA1BP35368 520 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 SLC6A11P48066 632 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 SGSHP51688 502 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 PIGHQ14442 188 aaPredicted RBP17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 UBXN2BQ14CS0 331 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 ACAP1Q15027 740 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 LGI2Q8N0V4 545 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 HJURPQ8NCD3 748 aaPredicted RBP17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 PJA1Q8NG27 643 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 NTAN1Q96AB6 310 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 MYEOVQ96EZ4 313 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 C1orf74Q96LT6 269 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 PNKPQ96T60 521 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 NCAPGQ9BPX3 1015 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 SIK2Q9H0K1 926 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 FBRSL1Q9HCM7 1045 aaKnown RBP17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 TMPRSS4Q9NRS4 437 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 IP6K2Q9UHH9 426 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 FBXO10Q9UK96 956 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 NDRG2Q9UN36 371 aaKnown RBP17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 MTF2Q9Y483 593 aaPredicted RBP17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 PCDHA13Q9Y5I0 950 aa17.71■□□□□ 0.42
RABGGTA-203ENST00000543002 MYO1FO00160 1098 aa17.7■□□□□ 0.42
RABGGTA-203ENST00000543002 HOXD9P28356 352 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-203ENST00000543002 CLCN5P51795 746 aa17.7■□□□□ 0.42
RABGGTA-203ENST00000543002 GRSF1Q12849 480 aaKnown RBP eCLIP17.7■□□□□ 0.42
RABGGTA-203ENST00000543002 AUHQ13825 339 aaKnown RBP17.7■□□□□ 0.42
RABGGTA-203ENST00000543002 TCEAL1Q15170 157 aa17.7■□□□□ 0.42
RABGGTA-203ENST00000543002 RNF43Q68DV7 783 aa17.7■□□□□ 0.42
RABGGTA-203ENST00000543002 FSTL4Q6MZW2 842 aa17.7■□□□□ 0.42
RABGGTA-203ENST00000543002 FBXL22Q6P050 247 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms