RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 TCF20Q9UGU0 1960 aaKnown RBP11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 COL4A2P08572 1712 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 TMEM110-MUSTN1A8MSY1 372 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 ACSL4O60488 711 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 PALMO75781 387 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 SLC34A2O95436 690 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 LATS1O95835 1130 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 RARAP10276 462 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 ARSAP15289 507 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 PSMC3P17980 439 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 IL4RP24394 825 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 GBP1P32455 592 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 MARCKSL1P49006 195 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 PEX5P50542 639 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 MLLT6P55198 1093 aaPredicted RBP11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 TNK2Q07912 1038 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 GRM2Q14416 872 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 MS4A13Q5J8X5 152 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 KCNT1Q5JUK3 1230 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 NUGGCQ68CJ6 796 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 RHBDF2Q6PJF5 856 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 NT5DC3Q86UY8 548 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 DDX42Q86XP3 938 aaKnown RBP eCLIP11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 PLCD3Q8N3E9 789 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 FAM71BQ8TC56 605 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 OSCP1Q8WVF1 389 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 KRT35Q92764 455 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 ACSF2Q96CM8 615 aaPredicted RBP11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 PRICKLE1Q96MT3 831 aaPredicted RBP11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 NECAB3Q96P71 396 aaPredicted RBP11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 HAPLN3Q96S86 360 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 WDCPQ9H6R7 721 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 GPATCH2LQ9NWQ4 482 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 PCSK1NQ9UHG2 260 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 USP18Q9UMW8 372 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 GUCA1BQ9UMX6 200 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 NR2E1Q9Y466 385 aa11.07□□□□□ -0.64
NPIPB3-210ENST00000542817 MYOFQ9NZM1 2061 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 IGLV3-10A0A075B6K4 115 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 C3orf70A6NLC5 250 aaPredicted RBP11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 TRDMT1O14717 391 aaKnown RBP11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 NARSO43776 548 aaKnown RBP11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 MOCS2O96007 188 aaPredicted RBP11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 L1CAMP32004 1257 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 VCPP55072 806 aaKnown RBP11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 NRG1Q02297 640 aaPredicted RBP11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 ADGRF1Q5T601 910 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 FBXL22Q6P050 247 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 RFWD3Q6PCD5 774 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 MTSS1LQ765P7 747 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 TMEM25Q86YD3 366 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 UNC45BQ8IWX7 931 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 TSC1Q92574 1164 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 IGSF8Q969P0 613 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 E2F7Q96AV8 911 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 BTN2A3PQ96KV6 586 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 CALR3Q96L12 384 aaKnown RBP11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 C1orf74Q96LT6 269 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 KCTD15Q96SI1 283 aaPredicted RBP11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 SNRNP25Q9BV90 132 aaKnown RBP11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 TSGA10Q9BZW7 698 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 DCLK3Q9C098 648 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 OSBPL2Q9H1P3 480 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 CLEC4EQ9ULY5 219 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 FAM50BQ9Y247 325 aa11.06□□□□□ -0.64
NPIPB3-210ENST00000542817 DRGXA6NNA5 263 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 CHADO15335 359 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 DDX3YO15523 660 aaKnown RBP11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 KRT86O43790 486 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 NRDCO43847 1150 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 CD48P09326 243 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 SLC2A3P11169 496 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 TACR2P21452 398 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 SLC1A1P43005 524 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 HARS2P49590 506 aaKnown RBP11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 MESP2Q0VG99 397 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 AUHQ13825 339 aaKnown RBP11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 DPYSL2Q16555 572 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 TAZQ16635 292 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 SMTNL2Q2TAL5 461 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 LRRC38Q5VT99 294 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 FYB2Q5VWT5 728 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 RAP1GAP2Q684P5 730 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 NAIF1Q69YI7 327 aaPredicted RBP11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 SCYL2Q6P3W7 929 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 DAAM2Q86T65 1068 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 CPXM2Q8N436 756 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 DEPDC1BQ8WUY9 529 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 TEKT4Q8WW24 435 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 RAPGEF5Q92565 580 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 ALG3Q92685 438 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 NXPE3Q969Y0 559 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 HES6Q96HZ4 224 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 LMLNQ96KR4 655 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 EBF3Q9H4W6 596 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 TMEM51Q9NW97 253 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 DUS2Q9NX74 493 aaKnown RBP11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 MARK1Q9P0L2 795 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 IGSF9Q9P2J2 1179 aa11.05□□□□□ -0.64
NPIPB3-210ENST00000542817 LCMT1Q9UIC8 334 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms