RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 IL18RAPO95256 599 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 BAG2O95816 211 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 NFICP08651 508 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 STAG3L1P0CL83 205 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 SMIM10L2AP0DMW4 78 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 SMIM10L2BP0DMW5 78 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 KCNJ1P48048 391 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 OSTNP61366 133 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 IL9RQ01113 521 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 CD83Q01151 205 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 ACSBG2Q5FVE4 666 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 CEP78Q5JTW2 689 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 TMEM270Q6UE05 265 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 CCDC81Q6ZN84 652 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 C3orf62Q6ZUJ4 267 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 TLK2Q86UE8 772 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 ZNF410Q86VK4 478 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 CPNE8Q86YQ8 564 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 MCOLN2Q8IZK6 566 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 HERVK_113Q902F9 699 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 ZNF184Q99676 751 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 RNF39Q9H2S5 420 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 UBN1Q9NPG3 1134 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 CCDC177Q9NQR7 707 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 SETD4Q9NVD3 440 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 PCDHB4Q9Y5E5 795 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 ALG6Q9Y672 507 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 WASF2Q9Y6W5 498 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 LACTBL1A8MY62 500 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 DYNC1LI2O43237 492 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 RNGTTO60942 597 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 DCTN3O75935 186 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 BAIAP3O94812 1187 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 RARGP13631 454 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 MZF1P28698 734 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 NOMO3P69849 1222 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 OCRLQ01968 901 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 PTP4A2Q12974 167 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 DEPDC1Q5TB30 811 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 SIGIRRQ6IA17 410 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 MTDHQ86UE4 582 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 SPATA24Q86W54 205 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 KBTBD2Q8IY47 623 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 CYP4X1Q8N118 509 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 ZNF564Q8TBZ8 553 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 CFAP36Q96G28 342 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 SNF8Q96H20 258 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 EGLN2Q96KS0 407 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 CYTH2Q99418 400 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 TTPALQ9BTX7 342 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 NUP85Q9BW27 656 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 NIF3L1Q9GZT8 377 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 CDC42EP4Q9H3Q1 356 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 DCTN4Q9UJW0 460 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 TLL2Q9Y6L7 1015 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 MROH7Q68CQ1 1323 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 A0A0J9YVX5 310 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 RRN3P2A6NIE6 340 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 PTPN4P29074 926 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 GNA15P30679 374 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 HOXC8P31273 242 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 MARCKSL1P49006 195 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 TFAMQ00059 246 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 CALCOCO2Q13137 446 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 CRHR2Q13324 411 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 LSAMPQ13449 338 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 DHX34Q14147 1143 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 KYNUQ16719 465 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 SLC10A6Q3KNW5 377 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 ARL13BQ3SXY8 428 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 METTL11BQ5VVY1 283 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 JADE1Q6IE81 842 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 CCDC137Q6PK04 289 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 IZUMO2Q6UXV1 221 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 PPP1R13LQ8WUF5 828 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 OSCP1Q8WVF1 389 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 CPA5Q8WXQ8 436 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 KRT35Q92764 455 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 PEX13Q92968 403 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 GRAMD1AQ96CP6 724 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 BTBD6Q96KE9 485 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 APBA2Q99767 749 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 BCO2Q9BYV7 579 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 ADAM33Q9BZ11 813 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 AVENQ9NQS1 362 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 SIRT5Q9NXA8 310 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 DDX56Q9NY93 547 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 UVRAGQ9P2Y5 699 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 CFL2Q9Y281 166 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 COMMD3-BMI1R4GMX3 469 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 H0YC42 278 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 GYG2O15488 501 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 TSPAN9O75954 239 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 PSMG1O95456 288 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 CYP2C9P11712 490 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 COMTP21964 271 aa8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 HOXA11P31270 313 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 TPD52P55327 224 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-221ENST00000542407 NIPAL4Q0D2K0 466 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms