RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 INTS11Q5TA45 600 aaKnown RBP3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 DENND2CQ68D51 928 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 KIRREL2Q6UWL6 708 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 RINLQ6ZS11 566 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 PARS2Q7L3T8 475 aaKnown RBP3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 OR4N4Q8N0Y3 316 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 RP9Q8TA86 221 aaKnown RBP3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 OVCA2Q8WZ82 227 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 SLC9A6Q92581 669 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 SDCCAG3Q96C92 435 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 CTHRC1Q96CG8 243 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 PRR11Q96HE9 360 aaPredicted RBP3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 MAELQ96JY0 434 aaKnown RBP3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 SLC26A6Q9BXS9 759 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 USP29Q9HBJ7 922 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 NOD2Q9HC29 1040 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 KCNK9Q9NPC2 374 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 UBN1Q9NPG3 1134 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 WASH6PQ9NQA3 447 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 DUSP22Q9NRW4 184 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 RASSF1Q9NS23 344 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 SMC4Q9NTJ3 1288 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 MGAT4CQ9UBM8 478 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 TLK1Q9UKI8 766 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 AMFRQ9UKV5 643 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 BAG5Q9UL15 447 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 ST3GAL5Q9UNP4 418 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 DNAJC16Q9Y2G8 782 aa3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 SETD1BQ9UPS6 1966 aaKnown RBP3.98□□□□□ -1.77
GTF2H3-209ENST00000542279 TBC1D3DA0A087WVF3 549 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TBC1D3IA0A087WXS9 549 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TBC1D3EA0A087X179 549 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TBC1D3KA0A087X1G2 549 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TBC1D3BA6NDS4 549 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TBC1D3FA6NER0 549 aaPredicted RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 DNAJC9-AS1A6NH13 148 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 A6NLC8 198 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TBC1D3LB9A6J9 549 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 PRRT4C9JH25 899 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 HOXC11O43248 304 aaPredicted RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 ORC4O43929 436 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 PRAMEF2O60811 474 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 MBD4O95243 580 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TFRCP02786 760 aaKnown RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 HNRNPA1P09651 372 aaKnown RBP eCLIP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TBC1D3HP0C7X1 549 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TMIGD3P0DMS9 266 aaPredicted RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 MMP8P22894 467 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 ITPKBP27987 946 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 PTH2RP49190 550 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 ZNF81P51508 661 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 CCR5P51681 352 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TAS2R50P59544 299 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 RPL15P61313 204 aaKnown RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TLE2Q04725 743 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 CCDC15Q0P6D6 951 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 LMAN2Q12907 356 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 DDX10Q13206 875 aaKnown RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 MPP3Q13368 585 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 ANKRD1Q15327 319 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 FAM187BQ17R55 369 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 ZNF484Q5JVG2 852 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 MAP3K21Q5TCX8 1036 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 KIAA0895LQ68EN5 471 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TBC1D3GQ6DHY5 549 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TBC1D3CQ6IPX1 549 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 RSRC2Q7L4I2 434 aaKnown RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 WDR53Q7Z5U6 358 aaPredicted RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 SRRM1Q8IYB3 904 aaKnown RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 TBC1D3Q8IZP1 549 aaPredicted RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 PNPLA1Q8N8W4 532 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 FAM71DQ8N9W8 422 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 PPHLN1Q8NEY8 458 aaKnown RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 ABHD11Q8NFV4 315 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 LINS1Q8NG48 757 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 HTRA1Q92743 480 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 LENG8Q96PV6 779 aaPredicted RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 MMS19Q96T76 1030 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 DUSP26Q9BV47 211 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 CINPQ9BW66 212 aaPredicted RBP3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 ABHD16BQ9H3Z7 469 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 ZHX3Q9H4I2 956 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 RMI1Q9H9A7 625 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 PLEKHA2Q9HB19 425 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 DLL3Q9NYJ7 618 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 SLC13A4Q9UKG4 626 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 ADAMTS5Q9UNA0 930 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 RCE1Q9Y256 329 aa3.97□□□□□ -1.77
GTF2H3-209ENST00000542279 MAST3O60307 1309 aa3.96□□□□□ -1.77
GTF2H3-209ENST00000542279 MBD3L5A6NJ08 208 aaPredicted RBP3.96□□□□□ -1.78
GTF2H3-209ENST00000542279 NKX2-8O15522 239 aa3.96□□□□□ -1.78
GTF2H3-209ENST00000542279 CNPP09543 421 aaKnown RBP3.96□□□□□ -1.78
GTF2H3-209ENST00000542279 CSF1P09603 554 aa3.96□□□□□ -1.78
GTF2H3-209ENST00000542279 CPA1P15085 419 aa3.96□□□□□ -1.78
GTF2H3-209ENST00000542279 GALNSP34059 522 aa3.96□□□□□ -1.78
GTF2H3-209ENST00000542279 KRT9P35527 623 aa3.96□□□□□ -1.78
GTF2H3-209ENST00000542279 GRIA3P42263 894 aa3.96□□□□□ -1.78
GTF2H3-209ENST00000542279 TUBP50607 506 aa3.96□□□□□ -1.78
GTF2H3-209ENST00000542279 RCAN1P53805 252 aa3.96□□□□□ -1.78
GTF2H3-209ENST00000542279 EEFSECP57772 596 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms