RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 PDLIM7Q9NR12 457 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 INIPQ9NRY2 104 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 EXTL3O43909 919 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 SPAG6O75602 509 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 ZNF189O75820 626 aaPredicted RBP15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 CST3P01034 146 aaPredicted RBP15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 PDGFRBP09619 1106 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 OSBPP22059 807 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 PRKCHP24723 683 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 ADORA2AP29274 412 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 LIG4P49917 911 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 OAZ1P54368 228 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 PKNOX1P55347 436 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 PPM1LQ5SGD2 360 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 RARS2Q5T160 578 aaKnown RBP15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 ARCQ7LC44 396 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 NLRP4Q96MN2 994 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 NTPCRQ9BSD7 190 aaKnown RBP15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 RNPEPQ9H4A4 650 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 FAF1Q9UNN5 650 aaPredicted RBP15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 LCTP09848 1927 aa15.28■□□□□ 0.04
AC005840.4-201ENST00000541242 TMEM221A6NGB7 291 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 SLC15A5A6NIM6 579 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 ZNF195O14628 629 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 KCNN4O15554 427 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 ATP5BP06576 529 aaKnown RBP15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 KRT3P12035 628 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 XRCC1P18887 633 aaPredicted RBP15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 GARTP22102 1010 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 SERPINB5P36952 375 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 ENTPD1P49961 510 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 ACTR2P61160 394 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 ADGRE1Q14246 886 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 PCLAFQ15004 111 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 ANKDD1AQ495B1 522 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 SCARA5Q6ZMJ2 495 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 APOBEC3FQ8IUX4 373 aaKnown RBP15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 USP13Q92995 863 aaPredicted RBP15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 PKP2Q99959 881 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 YIPF2Q9BWQ6 316 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 TEX13BQ9BXU2 312 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 JPH1Q9HDC5 661 aaPredicted RBP15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 C6orf203Q9P0P8 240 aaPredicted RBP15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 RIMS3Q9UJD0 308 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 ARHGAP26Q9UNA1 814 aa15.27■□□□□ 0.04
AC005840.4-201ENST00000541242 C19orf81C9J6K1 198 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 MAFGO15525 162 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 DGKIO75912 1065 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 NUDT2P50583 147 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 CCR3P51677 355 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 THOP1P52888 689 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 NR1H2P55055 460 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 PRKCEQ02156 737 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 NRF1Q16656 503 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 PTPN20Q4JDL3 420 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 SH3PXD2AQ5TCZ1 1133 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 ABHD15Q6UXT9 468 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 RNF168Q8IYW5 571 aaPredicted RBP15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 NIPA2Q8N8Q9 360 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 TMEM35BQ8NCS4 154 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 RAB3IL1Q8TBN0 382 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 ACAD9Q9H845 621 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 ACSS2Q9NR19 701 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 SEPT9Q9UHD8 586 aaPredicted RBP15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 CYTH4Q9UIA0 394 aa15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 AGO2Q9UKV8 859 aaKnown RBP15.27■□□□□ 0.03
AC005840.4-201ENST00000541242 F5H423 210 aaPredicted RBP15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 CFLARO15519 480 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 CSDE1O75534 798 aaKnown RBP15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 KRT7P08729 469 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 THRAP10827 490 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 GRIA1P42261 906 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 PSMD7P51665 324 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 CLDN10P78369 228 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 MS4A2Q01362 244 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 CNTN2Q02246 1040 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 SLC9B1Q4ZJI4 515 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 SLC44A4Q53GD3 710 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 THNSL1Q8IYQ7 743 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 DEPDC1BQ8WUY9 529 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 ATP6V0A1Q93050 837 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 PGBD4Q96DM1 585 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 MOCOSQ96EN8 888 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 LENG8Q96PV6 779 aaPredicted RBP15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 KCNK16Q96T55 309 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 ZNF358Q9NW07 568 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 MKS1Q9NXB0 559 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 PLK2Q9NYY3 685 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 RSL24D1Q9UHA3 163 aaKnown RBP15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 CNTN6Q9UQ52 1028 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 SSX2IPQ9Y2D8 614 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 SPATA31C2B4DYI2 1134 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 CHADO15335 359 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 PSAPP07602 524 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 EIF4BP23588 611 aaKnown RBP15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 MIPP30301 263 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 ZNF132P52740 706 aa15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 SLC10A2Q12908 348 aaPredicted RBP15.26■□□□□ 0.03
AC005840.4-201ENST00000541242 KLF10Q13118 480 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms