RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 GFRA2O00451 464 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 TBL1XO60907 577 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 PAPSS2O95340 614 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 GJB6O95452 261 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 TDGF1P13385 188 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 FLT3P36888 993 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 NBL1P41271 181 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 PXNP49023 591 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 FNTBP49356 437 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 CENPCQ03188 943 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 DEUP1Q05D60 604 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 KLHL30Q0D2K2 578 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 PTP4A2Q12974 167 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 EIF4EBP2Q13542 120 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 GEN1Q17RS7 908 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 SLC25A52Q3SY17 297 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 LCE2DQ5TA82 110 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 RAP1GAP2Q684P5 730 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 TRNP1Q6NT89 227 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 SND1Q7KZF4 910 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 SYT13Q7L8C5 426 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 CHSY1Q86X52 802 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 PHF13Q86YI8 300 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 LGI2Q8N0V4 545 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 CFAP52Q8N1V2 620 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 EMC1Q8N766 993 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 ZNF513Q8N8E2 541 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 ATP6V0D2Q8N8Y2 350 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 TXNDC5Q8NBS9 432 aaKnown RBP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 MYEOVQ96EZ4 313 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 CFAP57Q96MR6 1250 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 PRICKLE1Q96MT3 831 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 TBCBQ99426 244 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 FAM126AQ9BYI3 521 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 ADAM33Q9BZ11 813 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 HAUS4Q9H6D7 363 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 METTL5Q9NRN9 209 aaKnown RBP9.57□□□□□ -0.88
SNHG1-215ENST00000540904 PIGVQ9NUD9 493 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 RRN3Q9NYV6 651 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 CALCOCO1Q9P1Z2 691 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 TMEM59LQ9UK28 342 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 FBXO10Q9UK96 956 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 SLC27A6Q9Y2P4 619 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 PCDHGA2Q9Y5H1 932 aa9.57□□□□□ -0.88
SNHG1-215ENST00000540904 A0A1W2PQJ5 194 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 SGK1O00141 431 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 CBFA2T2O43439 604 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 ADAM23O75077 832 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 F9P00740 461 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 GYPCP04921 128 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 CALB1P05937 261 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 CHRM1P11229 460 aaPredicted RBP9.56□□□□□ -0.88
SNHG1-215ENST00000540904 KRT3P12035 628 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 SKILP12757 684 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 PDGFRAP16234 1089 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 TACR2P21452 398 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 HLA-FP30511 346 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 HOXA6P31267 233 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 WASP42768 502 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 ATXN1P54253 815 aaKnown RBP9.56□□□□□ -0.88
SNHG1-215ENST00000540904 RPS24P62847 133 aaKnown RBP9.56□□□□□ -0.88
SNHG1-215ENST00000540904 ZBED6P86452 979 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 ATP11AP98196 1134 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 HSF5Q4G112 596 aaPredicted RBP9.56□□□□□ -0.88
SNHG1-215ENST00000540904 MS4A13Q5J8X5 152 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 EOGTQ5NDL2 527 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 MPP7Q5T2T1 576 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 OTUD1Q5VV17 481 aaPredicted RBP9.56□□□□□ -0.88
SNHG1-215ENST00000540904 EGFLAMQ63HQ2 1017 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 ACAD10Q6JQN1 1059 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 MON1BQ7L1V2 547 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 ARCQ7LC44 396 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 ZNF571Q7Z3V5 609 aaPredicted RBP9.56□□□□□ -0.88
SNHG1-215ENST00000540904 TRMT11Q7Z4G4 463 aaKnown RBP9.56□□□□□ -0.88
SNHG1-215ENST00000540904 ANKS1BQ7Z6G8 1248 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 CHPFQ8IZ52 775 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 CAMKK1Q8N5S9 505 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 HJURPQ8NCD3 748 aaPredicted RBP9.56□□□□□ -0.88
SNHG1-215ENST00000540904 ZBTB44Q8NCP5 570 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 NELL1Q92832 810 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 NKD2Q969F2 451 aaPredicted RBP9.56□□□□□ -0.88
SNHG1-215ENST00000540904 NT5C3BQ969T7 300 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 IQCDQ96DY2 449 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 ACOX2Q99424 681 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 SYT11Q9BT88 431 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 SELENOOQ9BVL4 669 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 SLC2A11Q9BYW1 496 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 CIPCQ9C0C6 399 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 WDCPQ9H6R7 721 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 ABCB8Q9NUT2 735 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 TAS2R14Q9NYV8 317 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 HCN2Q9UL51 889 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 MMP17Q9ULZ9 603 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 CAPN11Q9UMQ6 739 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 LUC7L2Q9Y383 392 aaKnown RBP9.56□□□□□ -0.88
SNHG1-215ENST00000540904 STARD13Q9Y3M8 1113 aa9.56□□□□□ -0.88
SNHG1-215ENST00000540904 PROB1E7EW31 1015 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 F5H5T6 163 aa9.55□□□□□ -0.88
SNHG1-215ENST00000540904 DDX3XO00571 662 aaKnown RBP eCLIP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms