RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 WDR46O15213 610 aaKnown RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 ADAM23O75077 832 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 ITGAVP06756 1048 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 CYP2C8P10632 490 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 TSHRP16473 764 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 RPS12P25398 132 aaKnown RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 RPL10P27635 214 aaKnown RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 GCNT1Q02742 428 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 SLC18A2Q05940 514 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 MSLNQ13421 630 aaPredicted RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 KRT33BQ14525 404 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 DCAF4L1Q3SXM0 396 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 ATP13A4Q4VNC1 1196 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 FNBP1LQ5T0N5 605 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 SLFN12LQ6IEE8 588 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 B3GNT6Q6ZMB0 384 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 REM2Q8IYK8 340 aaPredicted RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 TNS4Q8IZW8 715 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 SLC26A7Q8TE54 656 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 EXT2Q93063 718 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 ATP2A3Q93084 1043 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 HDAC11Q96DB2 347 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 CATSPER2Q96P56 530 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 TAAR1Q96RJ0 339 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 C1orf21Q9H246 121 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 USP29Q9HBJ7 922 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 RBAKQ9NYW8 714 aaPredicted RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 CNTN3Q9P232 1028 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 IP6K2Q9UHH9 426 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 VPS51Q9UID3 782 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 FARP1Q9Y4F1 1045 aaPredicted RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 TNRC18O15417 2968 aaPredicted RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 MGAMO43451 1857 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 C15orf38-AP3S2A0A0A6YYH1 394 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 CCDC78A2IDD5 438 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 PRR5-ARHGAP8B1AHC4 643 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 C19orf81C9J6K1 198 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 PRRG1O14668 218 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 E2F6O75461 281 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 OXSR1O95747 527 aaPredicted RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 KITP10721 976 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 VCLP18206 1134 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 DNAJB2P25686 324 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 PEX2P28328 305 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 THPOP40225 353 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 RGS7P49802 495 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 ARHGAP8P85298 464 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 GAD2Q05329 585 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 FAAP100Q0VG06 881 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 MAMLD1Q13495 774 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 MSS51Q4VC12 460 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 HSP90AA5PQ58FG0 334 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 ANKRD22Q5VYY1 191 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 DARS2Q6PI48 645 aaKnown RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 TRIM72Q6ZMU5 477 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 RNF111Q6ZNA4 994 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 ARPINQ7Z6K5 226 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 CRLF3Q8IUI8 442 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 PDIK1LQ8N165 341 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 SIX5Q8N196 739 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 ICA1LQ8NDH6 482 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 BEST2Q8NFU1 509 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 URGCPQ8TCY9 931 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 GAB3Q8WWW8 586 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 NKD2Q969F2 451 aaPredicted RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 E2F7Q96AV8 911 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 SENP7Q9BQF6 1050 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 KIFC3Q9BVG8 833 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 CCDC106Q9BWC9 280 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 RNF208Q9H0X6 261 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 R3HDMLQ9H3Y0 253 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 SMYD3Q9H7B4 428 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 ADARB2Q9NS39 739 aaKnown RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 SNCAIPQ9Y6H5 919 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 KAT6AQ92794 2004 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 KNTC1P50748 2209 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 hCG_1818297A0A087WSY0 165 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 CCDC195A0A1B0GUA6 201 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 PQBP1O60828 265 aaKnown RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 SERPINA6P08185 405 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 PSMA2P25787 234 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 ATICP31939 592 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 SERPINB6P35237 376 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 RPL5P46777 297 aaKnown RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 AQP5P55064 265 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 ZNF200P98182 395 aaPredicted RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 GTF2BQ00403 316 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 BST1Q10588 318 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 CYLC2Q14093 348 aaPredicted RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 TRIP10Q15642 601 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 GRAMD1BQ3KR37 738 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 PLEKHA7Q6IQ23 1121 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 FBXL19Q6PCT2 694 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 KLHDC10Q6PID8 442 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 FEZF2Q8TBJ5 459 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 TMC2Q8TDI7 906 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 CPT1BQ92523 772 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 ZNF512Q96ME7 567 aaPredicted RBP5.38□□□□□ -1.55
PROM1-220ENST00000540805 BTBD9Q96Q07 612 aa5.38□□□□□ -1.55
PROM1-220ENST00000540805 PI4K2AQ9BTU6 479 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms