RNA–Protein interactions for RNA: ENST00000540280.1

TMEM109-203, Transcript of transmembrane protein 109, humanhuman

TSL 3

Gene TMEM109, Length 724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM109-203ENST00000540280 LIMS2Q7Z4I7 341 aa11.48□□□□□ -0.57
TMEM109-203ENST00000540280 THEM5Q8N1Q8 247 aa11.48□□□□□ -0.57
TMEM109-203ENST00000540280 EID2Q8N6I1 236 aa11.48□□□□□ -0.57
TMEM109-203ENST00000540280 STKLD1Q8NE28 680 aa11.48□□□□□ -0.57
TMEM109-203ENST00000540280 IPO4Q8TEX9 1081 aaKnown RBP11.48□□□□□ -0.57
TMEM109-203ENST00000540280 TAF4BQ92750 862 aa11.48□□□□□ -0.57
TMEM109-203ENST00000540280 FAM84AQ96KN4 292 aa11.48□□□□□ -0.57
TMEM109-203ENST00000540280 MRGPRX1Q96LB2 322 aa11.48□□□□□ -0.57
TMEM109-203ENST00000540280 ACOX2Q99424 681 aa11.48□□□□□ -0.57
TMEM109-203ENST00000540280 WSB2Q9NYS7 404 aaPredicted RBP11.48□□□□□ -0.57
TMEM109-203ENST00000540280 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
TMEM109-203ENST00000540280 RAD54BQ9Y620 910 aa11.48□□□□□ -0.57
TMEM109-203ENST00000540280 SDK2Q58EX2 2172 aa11.48□□□□□ -0.57
TMEM109-203ENST00000540280 ARID1BQ8NFD5 2236 aaPredicted RBP11.48□□□□□ -0.57
TMEM109-203ENST00000540280 NUMA1Q14980 2115 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 A0A0A0MRY4 1105 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 METTL12A8MUP2 240 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 GABRDO14764 452 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 PAPSS1O43252 624 aaPredicted RBP11.47□□□□□ -0.57
TMEM109-203ENST00000540280 USP12O75317 370 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 DDX6P26196 483 aaKnown RBP eCLIP11.47□□□□□ -0.57
TMEM109-203ENST00000540280 ERCC5P28715 1186 aaPredicted RBP11.47□□□□□ -0.57
TMEM109-203ENST00000540280 GRIA2P42262 883 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 TNFRSF4P43489 277 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 LSSP48449 732 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 INHBCP55103 352 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 MARSP56192 900 aaKnown RBP11.47□□□□□ -0.57
TMEM109-203ENST00000540280 BIRC3Q13489 604 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 NCOA4Q13772 614 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 CLCA4Q14CN2 919 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 TAF12Q16514 161 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 SGSM1Q2NKQ1 1148 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 KRT39Q6A163 491 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 PHTF2Q8N3S3 785 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 CADM4Q8NFZ8 388 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 SH3RF2Q8TEC5 729 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 SSC4DQ8WTU2 575 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 SNX19Q92543 992 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 EEF2KMTQ96G04 330 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 CCNL2Q96S94 520 aaPredicted RBP11.47□□□□□ -0.57
TMEM109-203ENST00000540280 XYLT2Q9H1B5 865 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 POLR1BQ9H9Y6 1135 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 TMEM8AQ9HCN3 771 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 TRPC7Q9HCX4 862 aa11.47□□□□□ -0.57
TMEM109-203ENST00000540280 ARMCX3Q9UH62 379 aaPredicted RBP11.47□□□□□ -0.57
TMEM109-203ENST00000540280 A0A1B0GTQ1 180 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 WIPF3A6NGB9 483 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 KCNJ18B7U540 433 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 SCAMP3O14828 347 aaKnown RBP11.46□□□□□ -0.57
TMEM109-203ENST00000540280 ZBTB24O43167 697 aaPredicted RBP11.46□□□□□ -0.57
TMEM109-203ENST00000540280 TACC1O75410 805 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 TADA3O75528 432 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 VNN1O95497 513 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 CKMP06732 381 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 TRIM49P0CI25 452 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 TRIM49CP0CI26 452 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 HMGA1P17096 107 aaKnown RBP11.46□□□□□ -0.57
TMEM109-203ENST00000540280 NTSR1P30989 418 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 LHX1P48742 406 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 STX17P56962 302 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 MYL6P60660 151 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 PPP3CAQ08209 521 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 SMARCB1Q12824 385 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 SRSF6Q13247 344 aaKnown RBP11.46□□□□□ -0.57
TMEM109-203ENST00000540280 TBR1Q16650 682 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 SOWAHAQ2M3V2 549 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 DPCR1Q3MIW9 517 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 WDR72Q3MJ13 1102 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 MGAT5BQ3V5L5 792 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 SGO2Q562F6 1265 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 WSCD1Q658N2 575 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 PDCL2Q8N4E4 241 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 MRPS31Q92665 395 aaKnown RBP11.46□□□□□ -0.57
TMEM109-203ENST00000540280 SGF29Q96ES7 293 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 FAXDC2Q96IV6 333 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 ACBD6Q9BR61 282 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 SRRTQ9BXP5 876 aaKnown RBP11.46□□□□□ -0.57
TMEM109-203ENST00000540280 HSFX1Q9UBD0 423 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 ADAMTS1Q9UHI8 967 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 L1RE1Q9UN81 338 aa11.46□□□□□ -0.57
TMEM109-203ENST00000540280 PLXNA2O75051 1894 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 PMM2O15305 246 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 ASS1P00966 412 aaKnown RBP11.45□□□□□ -0.58
TMEM109-203ENST00000540280 HLA-DRAP01903 254 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 WARSP23381 471 aaKnown RBP11.45□□□□□ -0.58
TMEM109-203ENST00000540280 CTSKP43235 329 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 UQCRFS1P47985 274 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 GCLMP48507 274 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 MXI1P50539 228 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 OXCT1P55809 520 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 TNNC1P63316 161 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 MYL7Q01449 175 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 ILKQ13418 452 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 KLHL40Q2TBA0 621 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 ZNF699Q32M78 642 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 CCDC40Q4G0X9 1142 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 ZNF667Q5HYK9 610 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 EGFLAMQ63HQ2 1017 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 SASS6Q6UVJ0 657 aa11.45□□□□□ -0.58
TMEM109-203ENST00000540280 TRMT11Q7Z4G4 463 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms