RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 LMNAP02545 664 aaKnown RBP13.89□□□□□ -0.19
CCDC130-202ENST00000540216 CALB1P05937 261 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 HOXD11P31277 338 aaPredicted RBP13.89□□□□□ -0.19
CCDC130-202ENST00000540216 SLC6A4P31645 630 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 TIE1P35590 1138 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 PBX1P40424 430 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 RNASE9P60153 205 aaKnown RBP13.89□□□□□ -0.19
CCDC130-202ENST00000540216 ASIC2Q16515 512 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 CRY1Q16526 586 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 SLC25A52Q3SY17 297 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 MS4A13Q5J8X5 152 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 SFMBT2Q5VUG0 894 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 RFWD3Q6PCD5 774 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 SND1Q7KZF4 910 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCDC130-202ENST00000540216 IRF2BP2Q7Z5L9 587 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 CCDC33Q8N5R6 958 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 TSTD1Q8NFU3 115 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 WFIKKN2Q8TEU8 576 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 UCMAQ8WVF2 138 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 RNF34Q969K3 372 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 PGAP3Q96FM1 320 aaPredicted RBP13.89□□□□□ -0.19
CCDC130-202ENST00000540216 HHIPQ96QV1 700 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 PCDHB18PQ96TA0 734 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 EPC1Q9H2F5 836 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 SEPT11Q9NVA2 429 aaKnown RBP13.89□□□□□ -0.19
CCDC130-202ENST00000540216 AIPL1Q9NZN9 384 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 TMEM59LQ9UK28 342 aa13.89□□□□□ -0.19
CCDC130-202ENST00000540216 GOLGA8SH3BPF8 625 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 TBL1XO60907 577 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 ALDH1A2O94788 518 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 HNRNPLP14866 589 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC130-202ENST00000540216 NTSR1P30989 418 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 PRKCIP41743 596 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 FNTBP49356 437 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 SULT1E1P49888 294 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
CCDC130-202ENST00000540216 NME3Q13232 169 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 C2CD6Q53TS8 623 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 BRMS1LQ5PSV4 323 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 ACBD5Q5T8D3 534 aaPredicted RBP13.88□□□□□ -0.19
CCDC130-202ENST00000540216 EMC10Q5UCC4 262 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 TTC39BQ5VTQ0 682 aaPredicted RBP13.88□□□□□ -0.19
CCDC130-202ENST00000540216 HEATR6Q6AI08 1181 aaKnown RBP13.88□□□□□ -0.19
CCDC130-202ENST00000540216 SDE2Q6IQ49 451 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 CHSY1Q86X52 802 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 CCDC117Q8IWD4 279 aaPredicted RBP13.88□□□□□ -0.19
CCDC130-202ENST00000540216 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC130-202ENST00000540216 SLC30A5Q8TAD4 765 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 PRICKLE1Q96MT3 831 aaPredicted RBP13.88□□□□□ -0.19
CCDC130-202ENST00000540216 C11orf70Q9BRQ4 267 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 SYT11Q9BT88 431 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 POLMQ9NP87 494 aaPredicted RBP13.88□□□□□ -0.19
CCDC130-202ENST00000540216 ADAM22Q9P0K1 906 aa13.88□□□□□ -0.19
CCDC130-202ENST00000540216 ZFHX2Q9C0A1 2572 aaPredicted RBP13.87□□□□□ -0.19
CCDC130-202ENST00000540216 SYNJ2BP-COX16A0A087WUM0 186 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 GOLGA6L7A0A1B0GV03 622 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 F5H5T6 163 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 SGK1O00141 431 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 AXIN1O15169 862 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 CBFA2T2O43439 604 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 GFRA3O60609 400 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 ADAM23O75077 832 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 TACR2P21452 398 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 TNFAIP3P21580 790 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 FLT3P36888 993 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 CXCR3P49682 368 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 SGSHP51688 502 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 DMWDQ09019 674 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 PTP4A2Q12974 167 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 GEN1Q17RS7 908 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 RABGAP1LQ5R372 815 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 OTUD1Q5VV17 481 aaPredicted RBP13.87□□□□□ -0.19
CCDC130-202ENST00000540216 EGFLAMQ63HQ2 1017 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 RAP1GAP2Q684P5 730 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 MON1BQ7L1V2 547 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 RASSF3Q86WH2 238 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 MFN1Q8IWA4 741 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 CHPFQ8IZ52 775 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 LGI2Q8N0V4 545 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 AHI1Q8N157 1196 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 C3orf20Q8ND61 904 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 SYN2Q92777 582 aaPredicted RBP13.87□□□□□ -0.19
CCDC130-202ENST00000540216 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
CCDC130-202ENST00000540216 GABRG3Q99928 467 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 METTL5Q9NRN9 209 aaKnown RBP13.87□□□□□ -0.19
CCDC130-202ENST00000540216 COX16Q9P0S2 106 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 IFNKQ9P0W0 207 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 XPO7Q9UIA9 1087 aaKnown RBP13.87□□□□□ -0.19
CCDC130-202ENST00000540216 HCN2Q9UL51 889 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 CLEC4EQ9ULY5 219 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 ITIH6Q6UXX5 1313 aa13.87□□□□□ -0.19
CCDC130-202ENST00000540216 MYO18AQ92614 2054 aaKnown RBP13.86□□□□□ -0.19
CCDC130-202ENST00000540216 ANTXRLA6NF34 631 aa13.86□□□□□ -0.19
CCDC130-202ENST00000540216 LUC7L3O95232 432 aaKnown RBP13.86□□□□□ -0.19
CCDC130-202ENST00000540216 PABPC1P11940 636 aaKnown RBP13.86□□□□□ -0.19
CCDC130-202ENST00000540216 HOXB2P14652 356 aa13.86□□□□□ -0.19
CCDC130-202ENST00000540216 HLA-FP30511 346 aa13.86□□□□□ -0.19
CCDC130-202ENST00000540216 SDC4P31431 198 aa13.86□□□□□ -0.19
CCDC130-202ENST00000540216 RDXP35241 583 aaKnown RBP13.86□□□□□ -0.19
CCDC130-202ENST00000540216 PTPN9P43378 593 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms