RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 KIAA1671Q9BY89 1806 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 GOLGA6BA6NDN3 693 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 H7C0C1 242 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 DNALI1O14645 258 aaPredicted RBP17.45■□□□□ 0.38
COPS3-212ENST00000539941 TP73O15350 636 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 IFNB1P01574 187 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 AMPD1P23109 780 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 CCR1P32246 355 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 ATP5OP48047 213 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 ITGA8P53708 1063 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 RAB33AQ14088 237 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 KCTD19Q17RG1 926 aaPredicted RBP17.45■□□□□ 0.38
COPS3-212ENST00000539941 P3H1Q32P28 736 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 CFAP58Q5T655 872 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 IZUMO3Q5VZ72 239 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 NCBP2-AS2Q69YL0 99 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 PCGF5Q86SE9 256 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 OVCA2Q8WZ82 227 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 CASP10Q92851 521 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 SSX2IPQ9Y2D8 614 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 RAD54BQ9Y620 910 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 SLC38A8A6NNN8 435 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 HACD1B0YJ81 288 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 C2CD2LO14523 706 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 CREB3O43889 395 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 SOAT2O75908 522 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 ZDHHC11BP0C7U3 371 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 SLC2A3P11169 496 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 RPL17P18621 184 aaKnown RBP17.44■□□□□ 0.38
COPS3-212ENST00000539941 ATF6P18850 670 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 VPS41P49754 854 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 PGFP49763 221 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 TPI1P60174 286 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 TAF10Q12962 218 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 GPS1Q13098 491 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 PAFAH1B3Q15102 231 aaKnown RBP17.44■□□□□ 0.38
COPS3-212ENST00000539941 TMEM240Q5SV17 173 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 HIBCHQ6NVY1 386 aaPredicted RBP17.44■□□□□ 0.38
COPS3-212ENST00000539941 PDZD4Q76G19 769 aaPredicted RBP17.44■□□□□ 0.38
COPS3-212ENST00000539941 ZC3H18Q86VM9 953 aaKnown RBP17.44■□□□□ 0.38
COPS3-212ENST00000539941 UNC45BQ8IWX7 931 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 IQCKQ8N0W5 287 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 ZNF276Q8N554 614 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 GLIS1Q8NBF1 620 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 CLP1Q92989 425 aaKnown RBP17.44■□□□□ 0.38
COPS3-212ENST00000539941 ANLNQ9NQW6 1124 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 TMPRSS4Q9NRS4 437 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.44■□□□□ 0.38
COPS3-212ENST00000539941 OSER1Q9NX31 292 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 FNIP2Q9P278 1114 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 TPX2Q9ULW0 747 aaKnown RBP17.44■□□□□ 0.38
COPS3-212ENST00000539941 TLR6Q9Y2C9 796 aa17.44■□□□□ 0.38
COPS3-212ENST00000539941 I6L893 689 aaPredicted RBP17.43■□□□□ 0.38
COPS3-212ENST00000539941 SMAPO00193 183 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 DCLK1O15075 740 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 MNAT1P51948 309 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 MORF4L2Q15014 288 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 SLC45A4Q5BKX6 768 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 TDHQ8IZJ6 230 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 VPS52Q8N1B4 723 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 PDZD8Q8NEN9 1154 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 PHOSPHO2Q8TCD6 241 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 HERVK_113Q902F9 699 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 OLFM3Q96PB7 478 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 CDK5RAP1Q96SZ6 601 aaKnown RBP17.43■□□□□ 0.38
COPS3-212ENST00000539941 ZBED2Q9BTP6 218 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 MRPL17Q9NRX2 175 aaKnown RBP17.43■□□□□ 0.38
COPS3-212ENST00000539941 DTLQ9NZJ0 730 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 OR12D3Q9UGF7 316 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 SHOC2Q9UQ13 582 aa17.43■□□□□ 0.38
COPS3-212ENST00000539941 LAMA2P24043 3122 aaKnown RBP17.43■□□□□ 0.38
COPS3-212ENST00000539941 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.42■□□□□ 0.38
COPS3-212ENST00000539941 EBAG9O00559 213 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 SHOX2O60902 331 aaPredicted RBP17.42■□□□□ 0.38
COPS3-212ENST00000539941 RARGP13631 454 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 HSD17B3P37058 310 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 GDF10P55107 478 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 NRG1Q02297 640 aaPredicted RBP17.42■□□□□ 0.38
COPS3-212ENST00000539941 GBE1Q04446 702 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 LRIG3Q6UXM1 1119 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 C4orf22Q6V702 233 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 FAM71DQ8N9W8 422 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 STKLD1Q8NE28 680 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 GPR152Q8TDT2 470 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 LRCH3Q96II8 777 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 QKIQ96PU8 341 aaKnown RBP eCLIP17.42■□□□□ 0.38
COPS3-212ENST00000539941 RUFY1Q96T51 708 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 ADAM7Q9H2U9 754 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 USP29Q9HBJ7 922 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 SFMBT1Q9UHJ3 866 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 KCNU1A8MYU2 1149 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 FAM72CH0Y354 149 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 FGF18O76093 207 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 LINC00271P0C7V0 271 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 ZSCAN5DPP0CG00 497 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 CSH1P0DML2 217 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 CSH2P0DML3 217 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 ETS1P14921 441 aa17.42■□□□□ 0.38
COPS3-212ENST00000539941 RPL22P35268 128 aaKnown RBP17.42■□□□□ 0.38
COPS3-212ENST00000539941 PMS2P54278 862 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms