RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 WDR45BQ5MNZ6 344 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 SYCP2LQ5T4T6 812 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 FYB2Q5VWT5 728 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 TMPRSS6Q8IU80 811 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 SEMA4DQ92854 862 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 FBXO44Q9H4M3 255 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 C6orf106Q9H6K1 298 aaPredicted RBP15.64■□□□□ 0.09
USB1-203ENST00000539737 TM7SF3Q9NS93 570 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.64■□□□□ 0.09
USB1-203ENST00000539737 WDR35Q9P2L0 1181 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 NAGPAQ9UK23 515 aa15.64■□□□□ 0.09
USB1-203ENST00000539737 LSM7Q9UK45 103 aaKnown RBP15.64■□□□□ 0.09
USB1-203ENST00000539737 CBX4O00257 560 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 FAM200BP0CF97 657 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 GNSP15586 552 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 CD58P19256 250 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 MTIF2P46199 727 aaKnown RBP15.63■□□□□ 0.09
USB1-203ENST00000539737 EFEMP1Q12805 493 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 KCNH2Q12809 1159 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 ZNF234Q14588 700 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 KIF19Q2TAC6 998 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 PRAMEF14Q5SWL7 426 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 RABEPKQ7Z6M1 372 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 BAHD1Q8TBE0 780 aaPredicted RBP15.63■□□□□ 0.09
USB1-203ENST00000539737 ENOX1Q8TC92 643 aaKnown RBP15.63■□□□□ 0.09
USB1-203ENST00000539737 RHBDD1Q8TEB9 315 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 CYB5D2Q8WUJ1 264 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 DNASE2BQ8WZ79 361 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 MTG2Q9H4K7 406 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 CSNK1G1Q9HCP0 422 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 ITM2CQ9NQX7 267 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 SCML2Q9UQR0 700 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 SNX11Q9Y5W9 270 aa15.63■□□□□ 0.09
USB1-203ENST00000539737 TRABD2BA6NFA1 517 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 BCAT2O15382 392 aaPredicted RBP15.62■□□□□ 0.09
USB1-203ENST00000539737 TSPAN3O60637 253 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 LETM1O95202 739 aaPredicted RBP15.62■□□□□ 0.09
USB1-203ENST00000539737 TBXAS1P24557 533 aaPredicted RBP15.62■□□□□ 0.09
USB1-203ENST00000539737 CORO1AP31146 461 aaKnown RBP15.62■□□□□ 0.09
USB1-203ENST00000539737 ACSL1P33121 698 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 MATKP42679 507 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 YWHAEP62258 255 aaKnown RBP15.62■□□□□ 0.09
USB1-203ENST00000539737 TYRO3Q06418 890 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 GOLGA8FQ08AF8 430 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 GOLGA8DPQ0D2H9 430 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 SLC14A1Q13336 389 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 STARD3Q14849 445 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 SKOR2Q2VWA4 1001 aaPredicted RBP15.62■□□□□ 0.09
USB1-203ENST00000539737 PREPLQ4J6C6 727 aaPredicted RBP15.62■□□□□ 0.09
USB1-203ENST00000539737 NUDT18Q6ZVK8 323 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 CREBRFQ8IUR6 639 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 DENND1CQ8IV53 801 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 CRYBG2Q8N1P7 616 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 FOXJ1Q92949 421 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 SIPA1Q96FS4 1042 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 NT5C1BQ96P26 610 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 NT5C1AQ9BXI3 368 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 CIPCQ9C0C6 399 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 NAT10Q9H0A0 1025 aaKnown RBP15.62■□□□□ 0.09
USB1-203ENST00000539737 THAP10Q9P2Z0 257 aaPredicted RBP15.62■□□□□ 0.09
USB1-203ENST00000539737 SUSD2Q9UGT4 822 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 FBXO10Q9UK96 956 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 APOBEC2Q9Y235 224 aaKnown RBP15.62■□□□□ 0.09
USB1-203ENST00000539737 NFE2L3Q9Y4A8 694 aa15.62■□□□□ 0.09
USB1-203ENST00000539737 TP53BP1Q12888 1972 aaPredicted RBP15.62■□□□□ 0.09
USB1-203ENST00000539737 METTL12A8MUP2 240 aa15.61■□□□□ 0.09
USB1-203ENST00000539737 PENKP01210 267 aaPredicted RBP15.61■□□□□ 0.09
USB1-203ENST00000539737 EPHX1P07099 455 aa15.61■□□□□ 0.09
USB1-203ENST00000539737 PRKCSHP14314 528 aaPredicted RBP15.61■□□□□ 0.09
USB1-203ENST00000539737 EEF1GP26641 437 aaKnown RBP15.61■□□□□ 0.09
USB1-203ENST00000539737 MYL5Q02045 173 aa15.61■□□□□ 0.09
USB1-203ENST00000539737 CUL2Q13617 745 aa15.61■□□□□ 0.09
USB1-203ENST00000539737 MAN2A1Q16706 1144 aa15.61■□□□□ 0.09
USB1-203ENST00000539737 ZNF394Q53GI3 561 aa15.61■□□□□ 0.09
USB1-203ENST00000539737 C11orf57Q6ZUT1 292 aaPredicted RBP15.61■□□□□ 0.09
USB1-203ENST00000539737 IRF2BP1Q8IU81 584 aa15.61■□□□□ 0.09
USB1-203ENST00000539737 RBBP8NLQ8NC74 664 aaPredicted RBP15.61■□□□□ 0.09
USB1-203ENST00000539737 C1orf216Q8TAB5 229 aa15.61■□□□□ 0.09
USB1-203ENST00000539737 CYFIP2Q96F07 1278 aa15.61■□□□□ 0.09
USB1-203ENST00000539737 PIWIL1Q96J94 861 aaKnown RBP15.61■□□□□ 0.09
USB1-203ENST00000539737 DCBLD2Q96PD2 775 aa15.61■□□□□ 0.09
USB1-203ENST00000539737 DNMT3LQ9UJW3 386 aa15.61■□□□□ 0.09
USB1-203ENST00000539737 AGO1Q9UL18 857 aaKnown RBP15.61■□□□□ 0.09
USB1-203ENST00000539737 MUC22E2RYF6 1773 aaPredicted RBP15.61■□□□□ 0.09
USB1-203ENST00000539737 SGSHP51688 502 aa15.6■□□□□ 0.09
USB1-203ENST00000539737 SLC8A3P57103 927 aa15.6■□□□□ 0.09
USB1-203ENST00000539737 HNRNPDQ14103 355 aaKnown RBP15.6■□□□□ 0.09
USB1-203ENST00000539737 KCNJ12Q14500 433 aa15.6■□□□□ 0.09
USB1-203ENST00000539737 DHRS13Q6UX07 377 aa15.6■□□□□ 0.09
USB1-203ENST00000539737 TMPRSS7Q7RTY8 843 aa15.6■□□□□ 0.09
USB1-203ENST00000539737 PRCCQ92733 491 aaPredicted RBP15.6■□□□□ 0.09
USB1-203ENST00000539737 CISHQ9NSE2 258 aa15.6■□□□□ 0.09
USB1-203ENST00000539737 PLXNA2O75051 1894 aa15.59■□□□□ 0.09
USB1-203ENST00000539737 GTPBP10A4D1E9 387 aaKnown RBP15.59■□□□□ 0.09
USB1-203ENST00000539737 H0Y8X5 98 aa15.59■□□□□ 0.09
USB1-203ENST00000539737 TULP2O00295 520 aa15.59■□□□□ 0.09
USB1-203ENST00000539737 GFRA2O00451 464 aa15.59■□□□□ 0.09
USB1-203ENST00000539737 SYNCRIPO60506 623 aaKnown RBP15.59■□□□□ 0.09
USB1-203ENST00000539737 TPM2P07951 284 aa15.59■□□□□ 0.09
USB1-203ENST00000539737 ITPKBP27987 946 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms