RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 FAM47DPA6NHR8 397 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 DCDC2CA8MYV0 355 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 GOLGA8MH3BSY2 632 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 NRP1O14786 923 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 DCLK1O15075 740 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 CREB3O43889 395 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 RTN3O95197 1032 aaPredicted RBP10.49□□□□□ -0.73
SPARC-209ENST00000539687 ZWINTO95229 277 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 IGLV3-25P01717 112 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 ALDH2P05091 517 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 FYNP06241 537 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 APRTP07741 180 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 INHBAP08476 426 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 AMPD1P23109 780 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 CNTFP26441 200 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 CCR1P32246 355 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 CCT5P48643 541 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 NDUFV1P49821 464 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 ATXN1P54253 815 aaKnown RBP10.49□□□□□ -0.73
SPARC-209ENST00000539687 NRG1Q02297 640 aaPredicted RBP10.49□□□□□ -0.73
SPARC-209ENST00000539687 IFRD2Q12894 506 aaPredicted RBP10.49□□□□□ -0.73
SPARC-209ENST00000539687 SEMA3BQ13214 749 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 TMED2Q15363 201 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 RAB6CQ53S08 254 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 CLLU1OSQ5K130 101 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 SYPL2Q5VXT5 272 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 ANKRD22Q5VYY1 191 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 ARMC3Q5W041 872 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 ADGRD1Q6QNK2 874 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 YTHDF3Q7Z739 585 aaKnown RBP10.49□□□□□ -0.73
SPARC-209ENST00000539687 TRABD2AQ86V40 505 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 MON1AQ86VX9 555 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 LRRC49Q8IUZ0 686 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 OR10T2Q8NGX3 314 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 SPPL2BQ8TCT7 592 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 ATXN2LQ8WWM7 1075 aaKnown RBP10.49□□□□□ -0.73
SPARC-209ENST00000539687 MAML1Q92585 1016 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 RNF34Q969K3 372 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 GRAMD1AQ96CP6 724 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 HDAC11Q96DB2 347 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 MTBPQ96DY7 904 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 PWWP2AQ96N64 755 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 PAAF1Q9BRP4 392 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 DHRS4Q9BTZ2 278 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 RAB6CQ9H0N0 254 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 ETNK1Q9HBU6 452 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 WDR6Q9NNW5 1121 aaKnown RBP10.49□□□□□ -0.73
SPARC-209ENST00000539687 KCNK9Q9NPC2 374 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 OLA1Q9NTK5 396 aaKnown RBP10.49□□□□□ -0.73
SPARC-209ENST00000539687 SAMD15Q9P1V8 674 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 IGSF9Q9P2J2 1179 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 RSPH14Q9UHP6 348 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 RABGEF1Q9UJ41 708 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 ZNF180Q9UJW8 692 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 ADAM28Q9UKQ2 775 aa10.49□□□□□ -0.73
SPARC-209ENST00000539687 SYNJ2BP-COX16A0A087WUM0 186 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 GOLGA6L7A0A1B0GV03 622 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 POC1B-GALNT4F8VUJ3 575 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 I3L4J1 428 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 IRAK2O43187 625 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 MFSD11O43934 449 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 KRT37O76014 449 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 ERCC2P18074 760 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 ELK3P41970 407 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 SERPINB9P50453 376 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 KPNA1P52294 538 aaPredicted RBP10.48□□□□□ -0.73
SPARC-209ENST00000539687 SLC5A3P53794 718 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 CAP1Q01518 475 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 PPIDQ08752 370 aaKnown RBP10.48□□□□□ -0.73
SPARC-209ENST00000539687 AP1B1Q10567 949 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 SPARCL1Q14515 664 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 PRPSAP1Q14558 356 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 MBTPS1Q14703 1052 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 SEPT7Q16181 437 aaKnown RBP10.48□□□□□ -0.73
SPARC-209ENST00000539687 PAN2Q504Q3 1202 aaKnown RBP10.48□□□□□ -0.73
SPARC-209ENST00000539687 ANKRD20A2Q5SQ80 823 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 FNBP1LQ5T0N5 605 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 ANKRD20A1Q5TYW2 823 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 ANKRD20A3Q5VUR7 823 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 NUGGCQ68CJ6 796 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 TTC19Q6DKK2 380 aaPredicted RBP10.48□□□□□ -0.73
SPARC-209ENST00000539687 MSANTD2Q6P1R3 559 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 LRRC8BQ6P9F7 803 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 BHLHA9Q7RTU4 235 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 GPRIN1Q7Z2K8 1008 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 RTN4RL1Q86UN2 441 aaPredicted RBP10.48□□□□□ -0.73
SPARC-209ENST00000539687 TAC4Q86UU9 113 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 NPAS4Q8IUM7 802 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 ANKMY2Q8IV38 441 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 SRRM1Q8IYB3 904 aaKnown RBP10.48□□□□□ -0.73
SPARC-209ENST00000539687 CACNA2D3Q8IZS8 1091 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 NUP93Q8N1F7 819 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 CCDC110Q8TBZ0 833 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 DQX1Q8TE96 717 aaKnown RBP10.48□□□□□ -0.73
SPARC-209ENST00000539687 FBF1Q8TES7 1133 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 ZNF296Q8WUU4 475 aaPredicted RBP10.48□□□□□ -0.73
SPARC-209ENST00000539687 LINC01599Q8WXQ3 324 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 CDKL2Q92772 493 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 CDK5RAP1Q96SZ6 601 aaKnown RBP10.48□□□□□ -0.73
SPARC-209ENST00000539687 TKTL2Q9H0I9 626 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms