RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 RHBDF2Q6PJF5 856 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 TTC9BQ8N6N2 239 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 PLD5Q8N7P1 536 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 CCHCR1Q8TD31 782 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 SNF8Q96H20 258 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 ZNF670Q9BS34 389 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 EBF2Q9HAK2 575 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 SGK1O00141 431 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 TIMP1P01033 207 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 ATF2P15336 505 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 ALDH7A1P49419 539 aaKnown RBP17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 GDF10P55107 478 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 NUGGCQ68CJ6 796 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 GBP7Q8N8V2 638 aaPredicted RBP17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 CCDC89Q8N998 374 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 ANKRD42Q8N9B4 389 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 IRGQQ8WZA9 623 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 CWH43Q9H720 699 aa17.66■□□□□ 0.42
PCDHB17P-201ENST00000539533 MAP3K6O95382 1288 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 ITIH2P19823 946 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 ITGA8P53708 1063 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 EIF3EP60228 445 aaKnown RBP17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 PRSS55Q6UWB4 352 aaPredicted RBP17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 NECAB2Q7Z6G3 386 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 ZC3H18Q86VM9 953 aaKnown RBP17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 MAB21L3Q8N8X9 362 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 NSMCE1Q8WV22 266 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 TOP1MTQ969P6 601 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 FAF2Q96CS3 445 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 THOC1Q96FV9 657 aaKnown RBP17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 WDR6Q9NNW5 1121 aaKnown RBP17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 MLXIPLQ9NP71 852 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 KCNK9Q9NPC2 374 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 ANLNQ9NQW6 1124 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 DDIT4Q9NX09 232 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 CTNNAL1Q9UBT7 734 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 PCDHB5Q9Y5E4 795 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 IFNB1P01574 187 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 AMHP03971 560 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 ALADP13716 330 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 GOT1P17174 413 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 RFC2P35250 354 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 DEFB103AP81534 67 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 BNIP1Q12981 228 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 FAM182AQ5T1J6 154 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 SLC9A4Q6AI14 798 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 SPATA21Q7Z572 469 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 CKAP2Q8WWK9 683 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 FUBP3Q96I24 572 aaKnown RBP eCLIP17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 TTPALQ9BTX7 342 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 FRMD8P1Q9BZ68 369 aaPredicted RBP17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 ARL2BPQ9Y2Y0 163 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 HEY1Q9Y5J3 304 aa17.65■□□□□ 0.42
PCDHB17P-201ENST00000539533 OR6C75A6NL08 312 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 I6L893 689 aaPredicted RBP17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 APOL1O14791 398 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 TBC1D4O60343 1298 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 SOAT2O75908 522 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 TTC4O95801 387 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 ACRP10323 421 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 RBP3P10745 1247 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 CPB1P15086 417 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 CCNHP51946 323 aaPredicted RBP17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 IRX1P78414 480 aaPredicted RBP17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 ELAVL2Q12926 359 aaKnown RBP17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 VSIG1Q86XK7 387 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 UNC45BQ8IWX7 931 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 SCML4Q8N228 414 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 GPR152Q8TDT2 470 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 AGAP11Q8TF27 550 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 CSPG4P5Q96PW8 444 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 SLC27A5Q9Y2P5 690 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 L3MBTL1Q9Y468 752 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 PATJQ8NI35 1801 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 FOXO6A8MYZ6 492 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 RAG1P15918 1043 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 CALRP27797 417 aaKnown RBP17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 MPP2Q14168 576 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 NOMO1Q15155 1222 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 P3H1Q32P28 736 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 GDAP1Q8TB36 358 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 LRRN4Q8WUT4 740 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 CRISPLD1Q9H336 500 aa17.64■□□□□ 0.41
PCDHB17P-201ENST00000539533 COL4A6Q14031 1691 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 ABHD14A-ACY1A0A1B0GW23 586 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 MCF2LO15068 1137 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 AMPD1P23109 780 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 NRLP54845 237 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 YWHAGP61981 247 aaKnown RBP eCLIP17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 ZKSCAN8Q15776 578 aaPredicted RBP17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 KYNUQ16719 465 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 RNF19BQ6ZMZ0 732 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 KLHL29Q96CT2 875 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 PGAP3Q96FM1 320 aaPredicted RBP17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 PWWP2AQ96N64 755 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 PLCD4Q9BRC7 762 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 VN1R3Q9BXE9 311 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 ETNK2Q9NVF9 386 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 DNAJC17Q9NVM6 304 aaKnown RBP17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 ANAPC5Q9UJX4 755 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms