RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 SORCS1Q8WY21 1168 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 ZC3H10Q96K80 434 aaKnown RBP16.26■□□□□ 0.19
CIT-210ENST00000539413 SPAG5Q96R06 1193 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 ERGIC2Q96RQ1 377 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 IRX2Q9BZI1 471 aaPredicted RBP16.26■□□□□ 0.19
CIT-210ENST00000539413 CIPCQ9C0C6 399 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 DUSP15Q9H1R2 295 aaPredicted RBP16.26■□□□□ 0.19
CIT-210ENST00000539413 CD248Q9HCU0 757 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 DDIT4Q9NX09 232 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 ELOVL2Q9NXB9 296 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 COX16Q9P0S2 106 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 STIM2Q9P246 746 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 DAAM1Q9Y4D1 1078 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 STON1Q9Y6Q2 735 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 SYCE3A1L190 88 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 SMTNL1A8MU46 457 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 LSM8O95777 96 aaKnown RBP16.25■□□□□ 0.19
CIT-210ENST00000539413 CHRNB2P17787 502 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 BCKDHBP21953 392 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 GBP1P32455 592 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 STAT1P42224 750 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 IL12RB1P42701 662 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 GABRB2P47870 512 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 ZNF165P49910 485 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 NOMO3P69849 1222 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 CDR2Q01850 454 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 EIF4HQ15056 248 aaKnown RBP16.25■□□□□ 0.19
CIT-210ENST00000539413 MS4A13Q5J8X5 152 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 MPP7Q5T2T1 576 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 NAA35Q5VZE5 725 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 RAP1GAP2Q684P5 730 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 RNF43Q68DV7 783 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 ERICH1Q86X53 443 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 ZNF677Q86XU0 584 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 XYLT1Q86Y38 959 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 CFAP52Q8N1V2 620 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 FRMD1Q8N878 549 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 HJURPQ8NCD3 748 aaPredicted RBP16.25■□□□□ 0.19
CIT-210ENST00000539413 ZNF397Q8NF99 534 aaPredicted RBP16.25■□□□□ 0.19
CIT-210ENST00000539413 UCMAQ8WVF2 138 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 RLN3Q8WXF3 142 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 CPA5Q8WXQ8 436 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 C18orf8Q96DM3 657 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 DDX50Q9BQ39 737 aaKnown RBP16.25■□□□□ 0.19
CIT-210ENST00000539413 ABCB8Q9NUT2 735 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.25■□□□□ 0.19
CIT-210ENST00000539413 THAP10Q9P2Z0 257 aaPredicted RBP16.25■□□□□ 0.19
CIT-210ENST00000539413 USP18Q9UMW8 372 aa16.25■□□□□ 0.19
CIT-210ENST00000539413 TEX33O43247 280 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 CD70P32970 193 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 NOS2P35228 1153 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 RNASE9P60153 205 aaKnown RBP16.24■□□□□ 0.19
CIT-210ENST00000539413 RPS24P62847 133 aaKnown RBP16.24■□□□□ 0.19
CIT-210ENST00000539413 FMO1Q01740 532 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 ZNF234Q14588 700 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 OTUD1Q5VV17 481 aaPredicted RBP16.24■□□□□ 0.19
CIT-210ENST00000539413 CHST9Q7L1S5 443 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 KIAA0907Q7Z7F0 614 aaPredicted RBP16.24■□□□□ 0.19
CIT-210ENST00000539413 CHSY1Q86X52 802 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 LGI2Q8N0V4 545 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 GPR161Q8N6U8 529 aaKnown RBP16.24■□□□□ 0.19
CIT-210ENST00000539413 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.24■□□□□ 0.19
CIT-210ENST00000539413 ATP6V0D2Q8N8Y2 350 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 LOXL4Q96JB6 756 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 BTN2A3PQ96KV6 586 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 ADAM33Q9BZ11 813 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 ARRDC1-AS1Q9H2J1 176 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 CALCOCO1Q9P1Z2 691 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 GGA2Q9UJY4 613 aa16.24■□□□□ 0.19
CIT-210ENST00000539413 TYW5A2RUC4 315 aaKnown RBP16.23■□□□□ 0.19
CIT-210ENST00000539413 KCNU1A8MYU2 1149 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 GOLGA8SH3BPF8 625 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 M0QYT0 321 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 NPC1O15118 1278 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 EPN2O95208 641 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 PABPC1P11940 636 aaKnown RBP16.23■□□□□ 0.19
CIT-210ENST00000539413 NDUFV2P19404 249 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 TFE3P19532 575 aaPredicted RBP16.23■□□□□ 0.19
CIT-210ENST00000539413 TACR2P21452 398 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 CCR1P32246 355 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 P2RY2P41231 377 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 MATKP42679 507 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 NME3Q13232 169 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 ENPP2Q13822 863 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 IQCB1Q15051 598 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 ELF2Q15723 593 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 CCDC6Q16204 474 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 MAP7D1Q3KQU3 841 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 FAM102AQ5T9C2 384 aaPredicted RBP16.23■□□□□ 0.19
CIT-210ENST00000539413 ADIPOR2Q86V24 386 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 MFN1Q8IWA4 741 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 AHI1Q8N157 1196 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 CARNMT1Q8N4J0 409 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 WFIKKN2Q8TEU8 576 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 RNF34Q969K3 372 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 NPY6RQ99463 290 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 SLC6A17Q9H1V8 727 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 RTN4Q9NQC3 1192 aaKnown RBP16.23■□□□□ 0.19
CIT-210ENST00000539413 SEMA4GQ9NTN9 838 aa16.23■□□□□ 0.19
CIT-210ENST00000539413 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms