RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 PRDM12Q9H4Q4 367 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 PSMC3IPQ9P2W1 217 aaPredicted RBP15.28■□□□□ 0.04
ATL3-203ENST00000538786 OR12D3Q9UGF7 316 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 OGDHLQ9ULD0 1010 aa15.28■□□□□ 0.04
ATL3-203ENST00000538786 FOXO6A8MYZ6 492 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 RASA4BC9J798 803 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 RASA4O43374 803 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 PQBP1O60828 265 aaKnown RBP15.27■□□□□ 0.04
ATL3-203ENST00000538786 OPHN1O60890 802 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 AVILO75366 819 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 ALDH2P05091 517 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 CREB1P16220 341 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 CYP2C18P33260 490 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 FDFT1P37268 417 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 AP1B1Q10567 949 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 CTXN3Q4LDR2 81 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 FAM171A1Q5VUB5 890 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 SRRM1Q8IYB3 904 aaKnown RBP15.27■□□□□ 0.04
ATL3-203ENST00000538786 CCNYQ8ND76 341 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 ZNF473Q8WTR7 871 aaKnown RBP15.27■□□□□ 0.04
ATL3-203ENST00000538786 RNF34Q969K3 372 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 LRRC39Q96DD0 335 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 MRPL9Q9BYD2 267 aaKnown RBP15.27■□□□□ 0.04
ATL3-203ENST00000538786 OSBPL2Q9H1P3 480 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 SMOC2Q9H3U7 446 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 CCDC134Q9H6E4 229 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 ARHGEF38Q9NXL2 777 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 RSPH14Q9UHP6 348 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 PCDHB5Q9Y5E4 795 aa15.27■□□□□ 0.04
ATL3-203ENST00000538786 NLRC5Q86WI3 1866 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 OR6C75A6NL08 312 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 RNF103O00237 685 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 TRIM66O15016 1216 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 IRAK2O43187 625 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 MYCP01106 439 aaPredicted RBP15.27■□□□□ 0.03
ATL3-203ENST00000538786 MAGEA11P43364 429 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 GATMP50440 423 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 IFRD2Q12894 506 aaPredicted RBP15.27■□□□□ 0.03
ATL3-203ENST00000538786 TCTN1Q2MV58 587 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 BRMS1LQ5PSV4 323 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 ZNF280DQ6N043 979 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 SCD5Q86SK9 330 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 TRABD2AQ86V40 505 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 CEP57Q86XR8 500 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 NPAS4Q8IUM7 802 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 CYTH2Q99418 400 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 DHRS4Q9BTZ2 278 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 GPR62Q9BZJ7 368 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 BRD8Q9H0E9 1235 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 KCNK9Q9NPC2 374 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 MARCH5Q9NX47 278 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 SENP1Q9P0U3 644 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 PRDM4Q9UKN5 801 aa15.27■□□□□ 0.03
ATL3-203ENST00000538786 EBAG9O00559 213 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 FGFR3P22607 806 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 MAGEA3P43357 314 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 SLC11A1P49279 550 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 CDK16Q00536 496 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 MTFR1Q15390 333 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 DENND5BQ6ZUT9 1274 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 NUP93Q8N1F7 819 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 AGGF1Q8N302 714 aaeCLIP15.26■□□□□ 0.03
ATL3-203ENST00000538786 CHMP6Q96FZ7 201 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 TMEM175Q9BSA9 504 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 FBXO44Q9H4M3 255 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 XAB2Q9HCS7 855 aaKnown RBP15.26■□□□□ 0.03
ATL3-203ENST00000538786 TMEM51Q9NW97 253 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 SCML2Q9UQR0 700 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 NR2E3Q9Y5X4 410 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 PATJQ8NI35 1801 aa15.26■□□□□ 0.03
ATL3-203ENST00000538786 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.25■□□□□ 0.03
ATL3-203ENST00000538786 TCRBV9S1A1TA0A576 114 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 LRIG2O94898 1065 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 PARNO95453 639 aaKnown RBP15.25■□□□□ 0.03
ATL3-203ENST00000538786 CXCL10P02778 98 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 CCL5P13501 91 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 MX2P20592 715 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 EPHB2P29323 1055 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 SERPINB6P35237 376 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 SARNPP82979 210 aaKnown RBP15.25■□□□□ 0.03
ATL3-203ENST00000538786 WASHC5Q12768 1159 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 EFTUD2Q15029 972 aaKnown RBP eCLIP15.25■□□□□ 0.03
ATL3-203ENST00000538786 PKN2Q16513 984 aaKnown RBP15.25■□□□□ 0.03
ATL3-203ENST00000538786 ADGRD1Q6QNK2 874 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 ZNF534Q76KX8 674 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 ANKRD33Q7Z3H0 272 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 MON1AQ86VX9 555 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 COLGALT1Q8NBJ5 622 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 NETO2Q8NC67 525 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 HAPLN3Q96S86 360 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 PAFAH2Q99487 392 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 PRMT1Q99873 361 aaKnown RBP15.25■□□□□ 0.03
ATL3-203ENST00000538786 RNF208Q9H0X6 261 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 HIPK3Q9H422 1215 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 EIF2B3Q9NR50 452 aaKnown RBP15.25■□□□□ 0.03
ATL3-203ENST00000538786 PTPRDP23468 1912 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 GSTA2P09210 222 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 KRT15P19012 456 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 CCR1P32246 355 aa15.25■□□□□ 0.03
ATL3-203ENST00000538786 STX2P32856 288 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms