RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 F7P08709 466 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-205ENST00000538545 ITGB8P26012 769 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 QPCTQ16769 361 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 MGAT5BQ3V5L5 792 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 ANKRD20A2Q5SQ80 823 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 ANKRD20A1Q5TYW2 823 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 ANKRD20A3Q5VUR7 823 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 FUT10Q6P4F1 479 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 SLC39A5Q6ZMH5 540 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 PALM2Q8IXS6 379 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 UNC5BQ8IZJ1 945 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 PDIK1LQ8N165 341 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 GDAP1Q8TB36 358 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 VWCEQ96DN2 955 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 PRMT1Q99873 361 aaKnown RBP14.57□□□□□ -0.08
ACTN1-205ENST00000538545 IL1RAPL1Q9NZN1 696 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 GMIPQ9P107 970 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 PAK5Q9P286 719 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 FNDC1Q4ZHG4 1894 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-205ENST00000538545 GOLGA8RI6L899 631 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 RNF103O00237 685 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 DGKIO75912 1065 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 VNN2O95498 520 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 AGTP01019 485 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 HMBSP08397 361 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 MMP13P45452 471 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 DUSP4Q13115 394 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 TNFAIP8L3Q5GJ75 292 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 VSTM1Q6UX27 236 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 C4orf50Q6ZRC1 276 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 ZNF534Q76KX8 674 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 PDCD7Q8N8D1 485 aaKnown RBP14.57□□□□□ -0.08
ACTN1-205ENST00000538545 USP33Q8TEY7 942 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 QKIQ96PU8 341 aaKnown RBP eCLIP14.57□□□□□ -0.08
ACTN1-205ENST00000538545 BEGAINQ9BUH8 593 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 TSPYL1Q9H0U9 437 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 MPP6Q9NZW5 540 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 KANSL3Q9P2N6 904 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 RABGEF1Q9UJ41 708 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 OGDHLQ9ULD0 1010 aa14.57□□□□□ -0.08
ACTN1-205ENST00000538545 A0A087WUV0 522 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-205ENST00000538545 TMEM120BA0PK00 339 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 PSMB4P28070 264 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 CXCR3P49682 368 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 SEMA3BQ13214 749 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 ARHGEF6Q15052 776 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 PCGF5Q86SE9 256 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 TAX1BP1Q86VP1 789 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 MIB1Q86YT6 1006 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 TMEM109Q9BVC6 243 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 UBP1Q9NZI7 540 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 NDUFAB1O14561 156 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 ARHGEF18Q6ZSZ5 1173 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 RELL1Q8IUW5 271 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 CDKL3Q8IVW4 592 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-205ENST00000538545 CRIPAKQ8N1N5 446 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 COLGALT1Q8NBJ5 622 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 PLAC1Q9HBJ0 212 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 SLC17A6Q9P2U8 582 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 CDY1Q9Y6F8 540 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 RASA4BC9J798 803 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 RASA4O43374 803 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 UGT1A9O60656 530 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 BRAFP15056 766 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 WASHC5Q12768 1159 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 MAPRE1Q15691 268 aaKnown RBP14.56□□□□□ -0.08
ACTN1-205ENST00000538545 MFSD5Q6N075 450 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 C14orf80Q86SX3 495 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 ZNF567Q8N184 647 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 RTP4Q96DX8 246 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 XPO6Q96QU8 1125 aaKnown RBP14.56□□□□□ -0.08
ACTN1-205ENST00000538545 NCAPGQ9BPX3 1015 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 ROPN1BQ9BZX4 212 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-205ENST00000538545 ROPN1Q9HAT0 212 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-205ENST00000538545 UGT1A7Q9HAW7 530 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 UGT1A10Q9HAW8 530 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 UGT1A8Q9HAW9 530 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 EURLQ9NYK6 297 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 TTLL3Q9Y4R7 772 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 MAD1L1Q9Y6D9 718 aa14.56□□□□□ -0.08
ACTN1-205ENST00000538545 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 IRAK2O43187 625 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 TRAPPC3O43617 180 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 PAGE1O75459 146 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 EMC10Q5UCC4 262 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 CES3Q6UWW8 571 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 NPAS4Q8IUM7 802 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 VPS52Q8N1B4 723 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 ARFGAP2Q8N6H7 521 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 APOL2Q9BQE5 337 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 KLC2Q9H0B6 622 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 MICAL3Q7RTP6 2002 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 SZT2Q5T011 3432 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 TCRBV9S1A1TA0A576 114 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 CXorf49A8MYA2 514 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-205ENST00000538545 CDH16O75309 829 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 EFEMP1Q12805 493 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 KBTBD12Q3ZCT8 623 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 PID1Q7Z2X4 250 aa14.55□□□□□ -0.08
ACTN1-205ENST00000538545 ATXN2LQ8WWM7 1075 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms