RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 FAM72CH0Y354 149 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 RNF103O00237 685 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 CREB3O43889 395 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 RPL9P32969 192 aaKnown RBP14.45□□□□□ -0.1
LIMK1-208ENST00000538333 WASHC5Q12768 1159 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 PDK1Q15118 436 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 TIGD5Q53EQ6 642 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 FAM72AQ5TYM5 149 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 STEAP4Q687X5 459 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 FAM72DQ6L9T8 149 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 CYS1Q717R9 158 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 FAM72BQ86X60 149 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 TP53INP2Q8IXH6 220 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 COLGALT1Q8NBJ5 622 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 SLC7A14Q8TBB6 771 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 OXNAD1Q96HP4 312 aaPredicted RBP14.45□□□□□ -0.1
LIMK1-208ENST00000538333 RTP3Q9BQQ7 232 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 PRDM12Q9H4Q4 367 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 MOCS1Q9NZB8 636 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.45□□□□□ -0.1
LIMK1-208ENST00000538333 PTPRDP23468 1912 aa14.45□□□□□ -0.1
LIMK1-208ENST00000538333 HMX2A2RU54 273 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 CASTOR2A6NHX0 329 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 EEF2KO00418 725 aaKnown RBP14.44□□□□□ -0.1
LIMK1-208ENST00000538333 MGEA5O60502 916 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 RFPL1O75677 317 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 KRT37O76014 449 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 CCNB1P14635 433 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 CCNFP41002 786 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 SKIV2L2P42285 1042 aaKnown RBP14.44□□□□□ -0.1
LIMK1-208ENST00000538333 AP1B1Q10567 949 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 DSTYKQ6XUX3 929 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 CDHR3Q6ZTQ4 885 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 ASRGL1Q7L266 308 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 CTU1Q7Z7A3 348 aaKnown RBP14.44□□□□□ -0.1
LIMK1-208ENST00000538333 PARP9Q8IXQ6 854 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 ADAM32Q8TC27 787 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 APBB2Q92870 758 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 FAM111AQ96PZ2 611 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 MANSC1Q9H8J5 431 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 CSNK1G1Q9HCP0 422 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 FAM155AB1AL88 458 aaPredicted RBP14.44□□□□□ -0.1
LIMK1-208ENST00000538333 CAPN9O14815 690 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 GPR182O15218 404 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 ZNF623O75123 536 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 ADAMTS4O75173 837 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 LTFP02788 710 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 USP17L7P0C7H9 530 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 KCNJ2P63252 427 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 SARNPP82979 210 aaKnown RBP14.44□□□□□ -0.1
LIMK1-208ENST00000538333 PLEKHG4Q58EX7 1191 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 LRRC8BQ6P9F7 803 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 TBC1D1Q86TI0 1168 aaPredicted RBP14.44□□□□□ -0.1
LIMK1-208ENST00000538333 PDCD7Q8N8D1 485 aaKnown RBP14.44□□□□□ -0.1
LIMK1-208ENST00000538333 SMARCD1Q96GM5 515 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 SRPK1Q96SB4 655 aaKnown RBP14.44□□□□□ -0.1
LIMK1-208ENST00000538333 ARHGAP39Q9C0H5 1083 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 MYLK2Q9H1R3 596 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 MKS1Q9NXB0 559 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 FBXW11Q9UKB1 542 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 GABRQQ9UN88 632 aa14.44□□□□□ -0.1
LIMK1-208ENST00000538333 F5H423 210 aaPredicted RBP14.43□□□□□ -0.1
LIMK1-208ENST00000538333 HGSO14964 777 aaPredicted RBP14.43□□□□□ -0.1
LIMK1-208ENST00000538333 PPP1R12AO14974 1030 aaPredicted RBP14.43□□□□□ -0.1
LIMK1-208ENST00000538333 ALDH1A2O94788 518 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 NQO1P15559 274 aaKnown RBP14.43□□□□□ -0.1
LIMK1-208ENST00000538333 PCSK1P29120 753 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 LGSNQ5TDP6 509 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 CD300LGQ6UXG3 332 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 ZNF567Q8N184 647 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 ZNF398Q8TD17 642 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 ARNTL2Q8WYA1 636 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 MTBPQ96DY7 904 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 STAMBPL1Q96FJ0 436 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 CEP41Q9BYV8 373 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 RHOBTB2Q9BYZ6 727 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 ARHGEF3Q9NR81 526 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 IGSF9Q9P2J2 1179 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 PADI3Q9ULW8 664 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 NLRC5Q86WI3 1866 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 PATJQ8NI35 1801 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 C2CD2LO14523 706 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 SEPT4O43236 478 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 STK10O94804 968 aaKnown RBP14.43□□□□□ -0.1
LIMK1-208ENST00000538333 UNC5CO95185 931 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 RPLP2P05387 115 aaKnown RBP14.43□□□□□ -0.1
LIMK1-208ENST00000538333 NCAM1P13591 858 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 ERCC2P18074 760 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 PSMB4P28070 264 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 CD52P31358 61 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 HCAR3P49019 387 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 DSC3Q14574 896 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 PARP6Q2NL67 630 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 MFSD14CQ5VZR4 134 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 FAM171BQ6P995 826 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 MYLPFQ96A32 169 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 ERP27Q96DN0 273 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 LRRC37BQ96QE4 947 aa14.43□□□□□ -0.1
LIMK1-208ENST00000538333 ALG13Q9NP73 1137 aaKnown RBP14.43□□□□□ -0.1
LIMK1-208ENST00000538333 KANSL3Q9P2N6 904 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms