RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 XIRP2A4UGR9 3374 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 CXorf49A8MYA2 514 aaPredicted RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 LPXNO60711 386 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 HUS1O60921 280 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 AVILO75366 819 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 RFPL1O75677 317 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 WFS1O76024 890 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 ALDH1A2O94788 518 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 PGK1P00558 417 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 SNRPAP09012 282 aaKnown RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 PDGFRBP09619 1106 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 NPR3P17342 541 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 PTPN1P18031 435 aaKnown RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 AMPD1P23109 780 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 GLUD2P49448 558 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 SULT1E1P49888 294 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 AIF1P55008 147 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 KCNJ2P63252 427 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 MRPS5P82675 430 aaKnown RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 CDK16Q00536 496 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 PURAQ00577 322 aaKnown RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 SCAPQ12770 1279 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 DPYSQ14117 519 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 PARP6Q2NL67 630 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 PPP6R3Q5H9R7 873 aaPredicted RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 FAXCQ5TGI0 409 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 UNC5AQ6ZN44 842 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 TIFABQ6ZNK6 161 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 CLEC20AQ6ZU45 233 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 MARK2Q7KZI7 788 aaKnown RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 BZW1Q7L1Q6 419 aaKnown RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 TBC1D1Q86TI0 1168 aaPredicted RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 HACE1Q8IYU2 909 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 VPS52Q8N1B4 723 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 GSDMBQ8TAX9 411 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 INPP5DQ92835 1189 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 PTPRN2Q92932 1015 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 NTAN1Q96AB6 310 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 MTBPQ96DY7 904 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 TMEM237Q96Q45 408 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 SLC9A7Q96T83 725 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 MAGEB5Q9BZ81 275 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 GOLGA2P5Q9HBQ8 144 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 NOD2Q9HC29 1040 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 ARHGEF4Q9NR80 690 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 TXLNGQ9NUQ3 528 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 ZC3H7BQ9UGR2 993 aaKnown RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 GGT7Q9UJ14 662 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 GINS2Q9Y248 185 aa9.54□□□□□ -0.88
DDB1-211ENST00000538280 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 TRIP12Q14669 1992 aaPredicted RBP9.54□□□□□ -0.88
DDB1-211ENST00000538280 A0A1W2PQ45 241 aaPredicted RBP9.53□□□□□ -0.88
DDB1-211ENST00000538280 A0A1W2PQY0 241 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 MYADML2A6NDP7 307 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 TRIM49D1C9J1S8 452 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 H3BRJ5 948 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 TRAFD1O14545 582 aaPredicted RBP9.53□□□□□ -0.88
DDB1-211ENST00000538280 DCLK1O15075 740 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 MFSD11O43934 449 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 PQBP1O60828 265 aaKnown RBP9.53□□□□□ -0.88
DDB1-211ENST00000538280 DNAJC6O75061 913 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 PIAS1O75925 651 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 FBXO21O94952 628 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 MAP3K6O95382 1288 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 MYL3P08590 195 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 KRT16P08779 473 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 CSH1P0DML2 217 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 CSH2P0DML3 217 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 T-ENOLP0DO92 83 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 TROVE2P10155 538 aaKnown RBP eCLIP9.53□□□□□ -0.88
DDB1-211ENST00000538280 GNAT1P11488 350 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 GOT1P17174 413 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 CNTFP26441 200 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 ALDH3A1P30838 453 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 ARL4AP40617 200 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 SERPINB9P50453 376 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 PITX1P78337 314 aaPredicted RBP9.53□□□□□ -0.88
DDB1-211ENST00000538280 NKX3-2P78367 333 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 CDK18Q07002 472 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 NIPAL4Q0D2K0 466 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 ADIGQ0VDE8 80 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 SEMA3BQ13214 749 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 MTM1Q13496 603 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 NAB1Q13506 487 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 DBN1Q16643 649 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 NBPF20Q3BBV1 942 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 PREPLQ4J6C6 727 aaPredicted RBP9.53□□□□□ -0.88
DDB1-211ENST00000538280 RAB41Q5JT25 222 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 ANKRD20A2Q5SQ80 823 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 LGSNQ5TDP6 509 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 ANKRD20A1Q5TYW2 823 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 ANKRD20A3Q5VUR7 823 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 FAM91A1Q658Y4 838 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 HEATR6Q6AI08 1181 aaKnown RBP9.53□□□□□ -0.88
DDB1-211ENST00000538280 TAF2Q6P1X5 1199 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 LRRC8BQ6P9F7 803 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 NLRP9Q7RTR0 991 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 LRRC6Q86X45 466 aa9.53□□□□□ -0.88
DDB1-211ENST00000538280 TMEM86AQ8N2M4 240 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms