RNA–Protein interactions for RNA: ENST00000538192.4

LRIT2-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 2, humanhuman

TSL 1 (best) BASIC

Gene LRIT2, Length 3,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2-202ENST00000538192 ZFP42Q96MM3 310 aa11.4□□□□□ -0.59
LRIT2-202ENST00000538192 KCTD15Q96SI1 283 aaPredicted RBP11.4□□□□□ -0.59
LRIT2-202ENST00000538192 ARL8BQ9NVJ2 186 aa11.4□□□□□ -0.59
LRIT2-202ENST00000538192 PAIP2BQ9ULR5 123 aaKnown RBP11.4□□□□□ -0.59
LRIT2-202ENST00000538192 ZNF711Q9Y462 761 aa11.4□□□□□ -0.59
LRIT2-202ENST00000538192 ANK1P16157 1881 aa11.4□□□□□ -0.59
LRIT2-202ENST00000538192 SIP14410 1827 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 PEX11AO75192 247 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 TMCC1O94876 653 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 HAUS5O94927 633 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 ALOX15P16050 662 aaPredicted RBP11.39□□□□□ -0.59
LRIT2-202ENST00000538192 IFRD2Q12894 506 aaPredicted RBP11.39□□□□□ -0.59
LRIT2-202ENST00000538192 ACVR2BQ13705 512 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 ACAP1Q15027 740 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 PDK2Q15119 407 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 DGKDQ16760 1214 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 C9orf57Q5W0N0 161 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 SLC27A1Q6PCB7 646 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 RFWD3Q6PCD5 774 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 RNF169Q8NCN4 708 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 FAM13CQ8NE31 585 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 DNAJC1Q96KC8 554 aaKnown RBP11.39□□□□□ -0.59
LRIT2-202ENST00000538192 RILPQ96NA2 401 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 TRAPPC9Q96Q05 1148 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 FRMD8P1Q9BZ68 369 aaPredicted RBP11.39□□□□□ -0.59
LRIT2-202ENST00000538192 POPDC2Q9HBU9 364 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 NMRK1Q9NWW6 199 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 I3L4J1 428 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 CHADO15335 359 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 NVLO15381 856 aaKnown RBP11.39□□□□□ -0.59
LRIT2-202ENST00000538192 SNRPAP09012 282 aaKnown RBP11.39□□□□□ -0.59
LRIT2-202ENST00000538192 ARL4AP40617 200 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 GRM5P41594 1212 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 FAM187BQ17R55 369 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 ZNF792Q3KQV3 632 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 PAN2Q504Q3 1202 aaKnown RBP11.39□□□□□ -0.59
LRIT2-202ENST00000538192 TTC39BQ5VTQ0 682 aaPredicted RBP11.39□□□□□ -0.59
LRIT2-202ENST00000538192 TWF2Q6IBS0 349 aaKnown RBP11.39□□□□□ -0.59
LRIT2-202ENST00000538192 HACE1Q8IYU2 909 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 CSPG4P5Q96PW8 444 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 APOL2Q9BQE5 337 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 KANSL3Q9P2N6 904 aa11.39□□□□□ -0.59
LRIT2-202ENST00000538192 PPARGC1AQ9UBK2 798 aaKnown RBP11.39□□□□□ -0.59
LRIT2-202ENST00000538192 SLC15A5A6NIM6 579 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 KPNA7A9QM74 516 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 TM9SF1O15321 606 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 BEST1O76090 585 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 NAT1P18440 290 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 TKTP29401 623 aaKnown RBP11.38□□□□□ -0.59
LRIT2-202ENST00000538192 L1CAMP32004 1257 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 KDSRQ06136 332 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 SOX4Q06945 474 aaPredicted RBP11.38□□□□□ -0.59
LRIT2-202ENST00000538192 NOTUMQ6P988 496 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 GPR142Q7Z601 462 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 PIGZQ86VD9 579 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 NUDCD3Q8IVD9 361 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 DTX3LQ8TDB6 740 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 SLC7A6OSQ96CW6 309 aaPredicted RBP11.38□□□□□ -0.59
LRIT2-202ENST00000538192 IFT43Q96FT9 208 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 NFKBIZQ9BYH8 718 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 BRCA1P38398 1863 aaKnown RBP11.38□□□□□ -0.59
LRIT2-202ENST00000538192 SMIM28A0A1B0GU29 152 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 MEIS3P2A8K0S8 358 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 CAPN9O14815 690 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 MAGEB3O15480 346 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 TREHO43280 583 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 APOEP02649 317 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 ENO1P06733 434 aaKnown RBP11.38□□□□□ -0.59
LRIT2-202ENST00000538192 MYL3P08590 195 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 CCNB1P14635 433 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 NUMBP49757 651 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 BST1Q10588 318 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 SAPCD2Q86UD0 394 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 ARHGAP18Q8N392 663 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 APPL2Q8NEU8 664 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 AGR3Q8TD06 166 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 USP6NLQ92738 828 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 MCUR1Q96AQ8 359 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 SNX27Q96L92 541 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 SLC4A5Q9BY07 1137 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 SHCBP1LQ9BZQ2 653 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 VTA1Q9NP79 307 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 ACSS2Q9NR19 701 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 DTLQ9NZJ0 730 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 CPA4Q9UI42 421 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 M0QYT0 321 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 GYG2O15488 501 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 MFSD11O43934 449 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 HUS1O60921 280 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 SMIM10L2AP0DMW4 78 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 SMIM10L2BP0DMW5 78 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 SAT1P21673 171 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 TGM2P21980 687 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 MGAT1P26572 445 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 ALDH18A1P54886 795 aaKnown RBP11.38□□□□□ -0.59
LRIT2-202ENST00000538192 MAP3K7CLP57077 242 aa11.38□□□□□ -0.59
LRIT2-202ENST00000538192 PLOD1Q02809 727 aaPredicted RBP11.38□□□□□ -0.59
LRIT2-202ENST00000538192 BST2Q10589 180 aaKnown RBP11.38□□□□□ -0.59
LRIT2-202ENST00000538192 CDKL3Q8IVW4 592 aaPredicted RBP11.38□□□□□ -0.59
LRIT2-202ENST00000538192 PGBD4Q96DM1 585 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms