RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ZNF670Q9BS34 389 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 VRTNQ9H8Y1 702 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 ARL8BQ9NVJ2 186 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 PRG3Q9Y2Y8 225 aaPredicted RBP8.97□□□□□ -0.97
UBE3B-208ENST00000538070 FIS1Q9Y3D6 152 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 STARD13Q9Y3M8 1113 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 CFAP73A6NFT4 308 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 UNC5CO95185 931 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 THP07101 528 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 HMBSP08397 361 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 CPT1AP50416 773 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 CLNS1AP54105 237 aaKnown RBP8.96□□□□□ -0.97
UBE3B-208ENST00000538070 AQP5P55064 265 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 MRPS5P82675 430 aaKnown RBP8.96□□□□□ -0.97
UBE3B-208ENST00000538070 POU5F1BQ06416 359 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 KIAA0319Q5VV43 1072 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 RAPH1Q70E73 1250 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 SLC26A9Q7LBE3 791 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 TDRPQ86YL5 185 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 SCAMP5Q8TAC9 235 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 NSMCE1Q8WV22 266 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 PCED1BQ96HM7 432 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 EBNA1BP2Q99848 306 aaKnown RBP8.96□□□□□ -0.97
UBE3B-208ENST00000538070 TBC1D10AQ9BXI6 508 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 MTMR10Q9NXD2 777 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 SMIM35A0A1B0GVV1 85 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 PTGESO14684 152 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 MSI1O43347 362 aaKnown RBP8.96□□□□□ -0.97
UBE3B-208ENST00000538070 F2P00734 622 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 AMHP03971 560 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 GSTA1P08263 222 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 GLRBP48167 497 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 TRIM32Q13049 653 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 SEPT6Q14141 434 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 HSP90AA5PQ58FG0 334 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 CERCAMQ5T4B2 595 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 CLEC20AQ6ZU45 233 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 UNC93AQ86WB7 457 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 SPATA6LQ8N4H0 392 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 POU5F2Q8N7G0 328 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 C10orf82Q8WW14 230 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 NUDCD1Q96RS6 583 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 TMEM209Q96SK2 561 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 DUSP16Q9BY84 665 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 FRMD8P1Q9BZ68 369 aaPredicted RBP8.96□□□□□ -0.97
UBE3B-208ENST00000538070 ARHGAP39Q9C0H5 1083 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 DNAI2Q9GZS0 605 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 TKTL2Q9H0I9 626 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 WDCPQ9H6R7 721 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 PRKAG3Q9UGI9 489 aa8.96□□□□□ -0.97
UBE3B-208ENST00000538070 MGAMO43451 1857 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 PRRC2BQ5JSZ5 2229 aaKnown RBP8.96□□□□□ -0.98
UBE3B-208ENST00000538070 LOC100653049A0A140TA62 436 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 MEI4A8MW99 385 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 PIRO00625 290 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 TPP1O14773 563 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 KRT34O76011 436 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 NCF2P19878 526 aaPredicted RBP8.96□□□□□ -0.98
UBE3B-208ENST00000538070 DLG2Q15700 870 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 PCSK7Q16549 785 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 N4BP2L1Q5TBK1 243 aaPredicted RBP8.96□□□□□ -0.98
UBE3B-208ENST00000538070 RNF43Q68DV7 783 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 EFCAB3Q8N7B9 438 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 C3orf58Q8NDZ4 430 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 GSDMBQ8TAX9 411 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 CDKL2Q92772 493 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 WNT8BQ93098 351 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 NMRK2Q9NPI5 230 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 CRTAC1Q9NQ79 661 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 SFMBT1Q9UHJ3 866 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 ZMYND8Q9ULU4 1186 aaPredicted RBP8.96□□□□□ -0.98
UBE3B-208ENST00000538070 NUMBLQ9Y6R0 609 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 COL1A2P08123 1366 aa8.96□□□□□ -0.98
UBE3B-208ENST00000538070 SDR42E2A6NKP2 422 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 DNAJC6O75061 913 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 SETSIPP0DME0 302 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 SLC8A1P32418 973 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 ACADSBP45954 432 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 SLC25A52Q3SY17 297 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 PKDCCQ504Y2 493 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 UBXN11Q5T124 520 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 SLC9A4Q6AI14 798 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 RFWD3Q6PCD5 774 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 ANKRD23Q86SG2 305 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 NT5DC4Q86YG4 428 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 IFNLR1Q8IU57 520 aaPredicted RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 SUGP1Q8IWZ8 645 aaKnown RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 ZNF567Q8N184 647 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 SLC25A41Q8N5S1 370 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 SCYL1Q96KG9 808 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 SIGLEC10Q96LC7 697 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 RAB3IPQ96QF0 476 aaPredicted RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 AGAP2Q99490 1192 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 CYP4F11Q9HBI6 524 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 TMEM30AQ9NV96 361 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 CNTN3Q9P232 1028 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 A0A0A0MRY4 1105 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 BCLAF3A2AJT9 711 aaKnown RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 MDM4O15151 490 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 MGRN1O60291 552 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms