RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 FGFR1OP2Q9NVK5 253 aa14□□□□□ -0.17
SMG6-203ENST00000536871 HAUS2Q9NVX0 235 aa14□□□□□ -0.17
SMG6-203ENST00000536871 SRRDQ9UH36 339 aa14□□□□□ -0.17
SMG6-203ENST00000536871 TRHDEQ9UKU6 1024 aa14□□□□□ -0.17
SMG6-203ENST00000536871 YJEFN3A6XGL0 299 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 E7ENQ6 273 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 NRP1O14786 923 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 BANF1O75531 89 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 FYNP06241 537 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 SNRPAP09012 282 aaKnown RBP13.99□□□□□ -0.17
SMG6-203ENST00000536871 TAC1P20366 129 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 DNAJB2P25686 324 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 CCND3P30281 292 aaPredicted RBP13.99□□□□□ -0.17
SMG6-203ENST00000536871 ACLYP53396 1101 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 WDR4P57081 412 aaKnown RBP13.99□□□□□ -0.17
SMG6-203ENST00000536871 SLC18A2Q05940 514 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 ARHGEF6Q15052 776 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 KBTBD12Q3ZCT8 623 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 BRMS1LQ5PSV4 323 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 RNF43Q68DV7 783 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 SLC24A5Q71RS6 500 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 GDAP1Q8TB36 358 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 CDKL2Q92772 493 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 PPP1R2P1Q96PQ5 205 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 COLEC11Q9BWP8 271 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 OSBPL2Q9H1P3 480 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 WDCPQ9H6R7 721 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 DDIT4Q9NX09 232 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 MKS1Q9NXB0 559 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMG6-203ENST00000536871 SDR42E2A6NKP2 422 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 CREB3O43889 395 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 MFSD11O43934 449 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 METTL18O95568 372 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 USP17L7P0C7H9 530 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 SATB1Q01826 763 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 CCDC15Q0P6D6 951 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 IFRD2Q12894 506 aaPredicted RBP13.99□□□□□ -0.17
SMG6-203ENST00000536871 ITPRIPL1Q6GPH6 555 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 TRIM42Q8IWZ5 723 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 DCP1BQ8IZD4 617 aaKnown RBP13.99□□□□□ -0.17
SMG6-203ENST00000536871 BANPQ8N9N5 519 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 COLGALT1Q8NBJ5 622 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 RNF169Q8NCN4 708 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 ZNF398Q8TD17 642 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 TTC17Q96AE7 1141 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 P2RY11Q96G91 374 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 APOPT1Q96IL0 206 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 SIGLEC10Q96LC7 697 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 PKMYT1Q99640 499 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 ABCC13Q9NSE7 274 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 PCDHA11Q9Y5I1 949 aa13.99□□□□□ -0.17
SMG6-203ENST00000536871 RNF103O00237 685 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 PSMD3O43242 534 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 MGEA5O60502 916 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 SPAG7O75391 227 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 POMCP01189 267 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 ALDH3A1P30838 453 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 RPA3P35244 121 aaPredicted RBP13.98□□□□□ -0.17
SMG6-203ENST00000536871 LIG3P49916 1009 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 PPIDQ08752 370 aaKnown RBP13.98□□□□□ -0.17
SMG6-203ENST00000536871 AP1B1Q10567 949 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 STEAP4Q687X5 459 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 SPATA2LQ8IUW3 424 aaPredicted RBP13.98□□□□□ -0.17
SMG6-203ENST00000536871 IGDCC3Q8IVU1 814 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 C4orf33Q8N1A6 199 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 PYROXD2Q8N2H3 581 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 TAB3Q8N5C8 712 aaPredicted RBP13.98□□□□□ -0.17
SMG6-203ENST00000536871 LZTR1Q8N653 840 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 HDAC11Q96DB2 347 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 CFAP36Q96G28 342 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 FUBP3Q96I24 572 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMG6-203ENST00000536871 PAIP2Q9BPZ3 127 aaKnown RBP13.98□□□□□ -0.17
SMG6-203ENST00000536871 RTP3Q9BQQ7 232 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 OSBPL7Q9BZF2 842 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 TTLL3Q9Y4R7 772 aa13.98□□□□□ -0.17
SMG6-203ENST00000536871 TIMM13Q9Y5L4 95 aaPredicted RBP13.98□□□□□ -0.17
SMG6-203ENST00000536871 FAM159BA6NKW6 160 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 LPXNO60711 386 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 DNAJC8O75937 253 aaPredicted RBP13.97□□□□□ -0.17
SMG6-203ENST00000536871 ALDH1A2O94788 518 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 ERCC2P18074 760 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 CALRP27797 417 aaKnown RBP13.97□□□□□ -0.17
SMG6-203ENST00000536871 FAM189BP81408 668 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 PPARDQ03181 441 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 YWHAHQ04917 246 aaPredicted RBP13.97□□□□□ -0.17
SMG6-203ENST00000536871 FRG1Q14331 258 aaKnown RBP13.97□□□□□ -0.17
SMG6-203ENST00000536871 NFE2Q16621 373 aaPredicted RBP13.97□□□□□ -0.17
SMG6-203ENST00000536871 DBN1Q16643 649 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 FYB2Q5VWT5 728 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 BSPRYQ5W0U4 402 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 HFE2Q6ZVN8 426 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 CHSY1Q86X52 802 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 ARHGAP18Q8N392 663 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 CCNYQ8ND76 341 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 STAMBPL1Q96FJ0 436 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 HAPLN3Q96S86 360 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 KCNK16Q96T55 309 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 IQCGQ9H095 443 aaKnown RBP13.97□□□□□ -0.17
SMG6-203ENST00000536871 PRDM12Q9H4Q4 367 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms