RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 SMIM10L2AP0DMW4 78 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 SMIM10L2BP0DMW5 78 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 IL12RB1P42701 662 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 STAT2P52630 851 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 NPEPPSP55786 919 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 CCT2P78371 535 aaKnown RBP7.3□□□□□ -1.24
CCDC60-203ENST00000536742 EFEMP1Q12805 493 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 RIN1Q13671 783 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 FBXO47Q5MNV8 452 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 TAF2Q6P1X5 1199 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 PDXDC1Q6P996 788 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 PCSK4Q6UW60 755 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 FAM160B2Q86V87 743 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 KBTBD6Q86V97 674 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 CIR1Q86X95 450 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-203ENST00000536742 ADAMTS14Q8WXS8 1223 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 PHKBQ93100 1093 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 HDAC10Q969S8 669 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 GPHA2Q96T91 129 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 RPP25Q9BUL9 199 aaKnown RBP7.3□□□□□ -1.24
CCDC60-203ENST00000536742 MANSC1Q9H8J5 431 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 LMAN1LQ9HAT1 526 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 PPP4R1LQ9P1A2 415 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 NYAP2Q9P242 653 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 TUBD1Q9UJT1 453 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 ZNF180Q9UJW8 692 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 SLC30A1Q9Y6M5 507 aa7.3□□□□□ -1.24
CCDC60-203ENST00000536742 PLXNB3Q9ULL4 1909 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 A0A1W2PRX2 142 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 DTNBO60941 627 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 CCDC192P0DO97 292 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 GSPT1P15170 499 aaKnown RBP7.29□□□□□ -1.24
CCDC60-203ENST00000536742 ZSCAN20P17040 1043 aaPredicted RBP7.29□□□□□ -1.24
CCDC60-203ENST00000536742 ELAVL4P26378 380 aaKnown RBP7.29□□□□□ -1.24
CCDC60-203ENST00000536742 POLGP54098 1239 aaPredicted RBP7.29□□□□□ -1.24
CCDC60-203ENST00000536742 PPP3CAQ08209 521 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 MGAT3Q09327 533 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 ODF1Q14990 250 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 WTAPQ15007 396 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 PPP2R5AQ15172 486 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 PPP4R3AQ6IN85 833 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 CXorf57Q6NSI4 855 aaKnown RBP7.29□□□□□ -1.24
CCDC60-203ENST00000536742 PARM1Q6UWI2 310 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 ABHD15Q6UXT9 468 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 ADGRE4PQ86SQ3 457 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 PIP4P1Q86T03 277 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 OR7D4Q8NG98 312 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 HOXB13Q92826 284 aaPredicted RBP7.29□□□□□ -1.24
CCDC60-203ENST00000536742 FGF14Q92915 247 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 DYNLL2Q96FJ2 89 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 RPL10LQ96L21 214 aaKnown RBP7.29□□□□□ -1.24
CCDC60-203ENST00000536742 LRRC37BQ96QE4 947 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 ING3Q9NXR8 418 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 ZIM2Q9NZV7 527 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 NDRG2Q9UN36 371 aaKnown RBP7.29□□□□□ -1.24
CCDC60-203ENST00000536742 LAMA4Q16363 1823 aa7.29□□□□□ -1.24
CCDC60-203ENST00000536742 BCLAF3A2AJT9 711 aaKnown RBP7.28□□□□□ -1.24
CCDC60-203ENST00000536742 SGTAO43765 313 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 RHOBTB1O94844 696 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 ZRANB2O95218 330 aaKnown RBP eCLIP7.28□□□□□ -1.24
CCDC60-203ENST00000536742 IL33O95760 270 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 CTSAP10619 480 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 KLRC2P26717 231 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 CALML3P27482 149 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 CD52P31358 61 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 CLCN4P51793 760 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 CREB5Q02930 508 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 LMAN2Q12907 356 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 IKQ13123 557 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-203ENST00000536742 DUSP8Q13202 625 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 LY6DQ14210 128 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 ELF2Q15723 593 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 FAM102BQ5T8I3 360 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 SEPT14Q6ZU15 432 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 GET4Q7L5D6 327 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-203ENST00000536742 TAX1BP1Q86VP1 789 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 VPS52Q8N1B4 723 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 GIMAP8Q8ND71 665 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-203ENST00000536742 SMG7Q92540 1137 aaKnown RBP7.28□□□□□ -1.24
CCDC60-203ENST00000536742 TSR2Q969E8 191 aaKnown RBP7.28□□□□□ -1.24
CCDC60-203ENST00000536742 AIFM3Q96NN9 605 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 SLC2A13Q96QE2 648 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 DPYSL5Q9BPU6 564 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 C7orf25Q9BPX7 421 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 C16orf70Q9BSU1 422 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 CRNKL1Q9BZJ0 848 aaKnown RBP7.28□□□□□ -1.24
CCDC60-203ENST00000536742 ENKD1Q9H0I2 346 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 ZBP1Q9H171 429 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 AGO3Q9H9G7 860 aaKnown RBP7.28□□□□□ -1.24
CCDC60-203ENST00000536742 C1orf112Q9NSG2 853 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 KLHL42Q9P2K6 505 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 IP6K2Q9UHH9 426 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 CCPG1Q9ULG6 757 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 DNM3Q9UQ16 869 aa7.28□□□□□ -1.24
CCDC60-203ENST00000536742 COL5A1P20908 1838 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-203ENST00000536742 ASCC3Q8N3C0 2202 aaKnown RBP7.27□□□□□ -1.25
CCDC60-203ENST00000536742 TMEM232C9JQI7 657 aa7.27□□□□□ -1.25
CCDC60-203ENST00000536742 INPPL1O15357 1258 aa7.27□□□□□ -1.25
CCDC60-203ENST00000536742 ITGB3P05106 788 aa7.27□□□□□ -1.25
CCDC60-203ENST00000536742 ADSSP30520 456 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms