RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ZNF202O95125 648 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 ADH4P08319 380 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 CYP3A4P08684 503 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 CSF1P09603 554 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 CHN1P15882 459 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 DUSP1P28562 367 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 SLC8A1P32418 973 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 PGM1P36871 562 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 PLA2G5P39877 138 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 FOXL2P58012 376 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 TAP1Q03518 808 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.01□□□□□ -1.45
PRKDC-208ENST00000536710 FOXI1Q12951 378 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 FAM180BQ6P0A1 224 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 KIAA1324Q6UXG2 1013 aaKnown RBP6.01□□□□□ -1.45
PRKDC-208ENST00000536710 SLC29A4Q7RTT9 530 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 ZNF804AQ7Z570 1209 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 RASAL3Q86YV0 1011 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 BEND2Q8NDZ0 799 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 SRFBP1Q8NEF9 429 aaKnown RBP6.01□□□□□ -1.45
PRKDC-208ENST00000536710 MAFAQ8NHW3 353 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-208ENST00000536710 AKAP1Q92667 903 aaKnown RBP eCLIP6.01□□□□□ -1.45
PRKDC-208ENST00000536710 EDC3Q96F86 508 aaKnown RBP6.01□□□□□ -1.45
PRKDC-208ENST00000536710 SNX18Q96RF0 628 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 JMJD4Q9H9V9 463 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 MAP3K20Q9NYL2 800 aaKnown RBP6.01□□□□□ -1.45
PRKDC-208ENST00000536710 AFG3L2Q9Y4W6 797 aa6.01□□□□□ -1.45
PRKDC-208ENST00000536710 EPN1Q9Y6I3 576 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-208ENST00000536710 C3orf70A6NLC5 250 aaPredicted RBP6□□□□□ -1.45
PRKDC-208ENST00000536710 TTC34A8MYJ7 566 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 GCOM1H8Y6P7 765 aaPredicted RBP6□□□□□ -1.45
PRKDC-208ENST00000536710 GRM8O00222 908 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 ELFN1P0C7U0 828 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 ADRA1BP35368 520 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 PNPLA4P41247 253 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 AGTR2P50052 363 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 NR1H2P55055 460 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 WDR5P61964 334 aaKnown RBP6□□□□□ -1.45
PRKDC-208ENST00000536710 CYP4F2P78329 520 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 MFSD13AQ14CX5 517 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 CNGA3Q16281 694 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 RUNDC3AQ59EK9 446 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 TERB1Q8NA31 727 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 ST8SIA4Q92187 359 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 HDAC2Q92769 488 aaKnown RBP6□□□□□ -1.45
PRKDC-208ENST00000536710 KCNJ9Q92806 393 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 HERC2P3Q9BVR0 1158 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 ARHGAP39Q9C0H5 1083 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 FZD4Q9ULV1 537 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 TBX20Q9UMR3 447 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 SUFUQ9UMX1 484 aa6□□□□□ -1.45
PRKDC-208ENST00000536710 COPG1Q9Y678 874 aaKnown RBP6□□□□□ -1.45
PRKDC-208ENST00000536710 CLIC1O00299 241 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 NARSO43776 548 aaKnown RBP5.99□□□□□ -1.45
PRKDC-208ENST00000536710 MBPP02686 304 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-208ENST00000536710 WEE2P0C1S8 567 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 ACP5P13686 325 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 APEHP13798 732 aaKnown RBP5.99□□□□□ -1.45
PRKDC-208ENST00000536710 DRD4P21917 467 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 VPS41P49754 854 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 CFHR3Q02985 330 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 CDK18Q07002 472 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 GOLGA8FQ08AF8 430 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 ERCC6LQ2NKX8 1250 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 CBWD5Q5RIA9 395 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 TSTD2Q5T7W7 516 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 HECTD2Q5U5R9 776 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 ANO7Q6IWH7 933 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 TMEM65Q6PI78 240 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 KYAT3Q6YP21 454 aaKnown RBP5.99□□□□□ -1.45
PRKDC-208ENST00000536710 ZUFSPQ96AP4 578 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 DAZAP1Q96EP5 407 aaKnown RBP5.99□□□□□ -1.45
PRKDC-208ENST00000536710 PPP1R10Q96QC0 940 aaKnown RBP5.99□□□□□ -1.45
PRKDC-208ENST00000536710 MACROD1Q9BQ69 325 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 SENP7Q9BQF6 1050 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 THAP7Q9BT49 309 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-208ENST00000536710 PAIP1Q9H074 479 aaKnown RBP5.99□□□□□ -1.45
PRKDC-208ENST00000536710 TMX4Q9H1E5 349 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-208ENST00000536710 ACAD9Q9H845 621 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 PREBQ9HCU5 417 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 HSF4Q9ULV5 492 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 GDAQ9Y2T3 454 aa5.99□□□□□ -1.45
PRKDC-208ENST00000536710 C1QTNF3-AMACRE9PGA6 284 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 GCATO75600 419 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 KAT7O95251 611 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 TNNT1P13805 278 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 MCM7P33993 719 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 GALNT2Q10471 571 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 TDGQ13569 410 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 KCNB1Q14721 858 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 ZNF169Q14929 603 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-208ENST00000536710 GPR68Q15743 365 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 NFIL3Q16649 462 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 WDR45BQ5MNZ6 344 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 SLC9C2Q5TAH2 1124 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 IGFL4Q6B9Z1 124 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 SERPINA13PQ6UXR4 307 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 DCDC5Q6ZRR9 648 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 LRRC8DQ7L1W4 858 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 BCDIN3DQ7Z5W3 292 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms