RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 OPTNQ96CV9 577 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 APIPQ96GX9 242 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 GLOD4Q9HC38 313 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 A1CFQ9NQ94 594 aaKnown RBP6.4□□□□□ -1.38
CLIP1-207ENST00000536634 DLL3Q9NYJ7 618 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 COL20A1Q9P218 1284 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 AFF4Q9UHB7 1163 aaKnown RBP6.4□□□□□ -1.38
CLIP1-207ENST00000536634 SNX14Q9Y5W7 946 aa6.4□□□□□ -1.38
CLIP1-207ENST00000536634 MYO3BQ8WXR4 1341 aa6.4□□□□□ -1.39
CLIP1-207ENST00000536634 MYH3P11055 1940 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 PYCARD-AS1I3L0S3 204 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 MASP2O00187 686 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 MAP4K4O95819 1239 aaPredicted RBP6.39□□□□□ -1.39
CLIP1-207ENST00000536634 ZKSCAN1P17029 563 aaPredicted RBP6.39□□□□□ -1.39
CLIP1-207ENST00000536634 FBLP22087 321 aaKnown RBP6.39□□□□□ -1.39
CLIP1-207ENST00000536634 ALDH9A1P49189 494 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 RPS16P62249 146 aaKnown RBP6.39□□□□□ -1.39
CLIP1-207ENST00000536634 SEMA5AQ13591 1074 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 FAM153CQ494X1 144 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 CCDC152Q4G0S7 254 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 SLC44A4Q53GD3 710 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 TTLL5Q6EMB2 1281 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 ANKRD18AQ8IVF6 992 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 CERS5Q8N5B7 392 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 OSCP1Q8WVF1 389 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 NELL1Q92832 810 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 PPP2R3CQ969Q6 453 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 NMD3Q96D46 503 aaKnown RBP6.39□□□□□ -1.39
CLIP1-207ENST00000536634 LRRC27Q9C0I9 530 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 COA1Q9GZY4 146 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 OGDHLQ9ULD0 1010 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 ZNF804BA4D1E1 1349 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 CLSPNQ9HAW4 1339 aa6.39□□□□□ -1.39
CLIP1-207ENST00000536634 CCL15-CCL14A0A0B4J2E2 113 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 MBD3L4A6NDZ8 208 aaPredicted RBP6.38□□□□□ -1.39
CLIP1-207ENST00000536634 MBD3L3A6NE82 208 aaPredicted RBP6.38□□□□□ -1.39
CLIP1-207ENST00000536634 ZNF213O14771 459 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 MGEA5O60502 916 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 PROP1O75360 226 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 C1RP00736 705 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 NDUFB7P17568 137 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 CYP2C18P33260 490 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 CCT4P50991 539 aaKnown RBP6.38□□□□□ -1.39
CLIP1-207ENST00000536634 PRKAG1P54619 331 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 NHLH1Q02575 133 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 CCL15Q16663 113 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 KCTD20Q7Z5Y7 419 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 ABRAQ8N0Z2 381 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 SPSB4Q96A44 273 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 APOL5Q9BWW9 433 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 PCGF6Q9BYE7 350 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 VEZTQ9HBM0 779 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 ZNF287Q9HBT7 754 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 SH2B3Q9UQQ2 575 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 ARAP2Q8WZ64 1704 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 A0A1B0GUL6 1792 aa6.38□□□□□ -1.39
CLIP1-207ENST00000536634 MAPK8IP3Q9UPT6 1336 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 A0A1W2PPC1 479 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 SNAP23O00161 211 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 RBMXL2O75526 392 aaKnown RBP6.37□□□□□ -1.39
CLIP1-207ENST00000536634 PCCAP05165 728 aaPredicted RBP6.37□□□□□ -1.39
CLIP1-207ENST00000536634 HNRNPCP07910 306 aaKnown RBP eCLIP6.37□□□□□ -1.39
CLIP1-207ENST00000536634 CCL5P13501 91 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 IL1R1P14778 569 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 ENGP17813 658 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 KLRC1P26715 233 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 PDE1AP54750 535 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 RIPK4P57078 832 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 VGLL4Q14135 290 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 DLGAP5Q15398 846 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 SUPT20HL1Q3ZLR7 823 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 SYCE2Q6PIF2 218 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 DGKHQ86XP1 1220 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 DEFB123Q8N688 67 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 XAGE5Q8WWM1 108 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 SOCS4Q8WXH5 440 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 PRMT6Q96LA8 375 aaPredicted RBP6.37□□□□□ -1.39
CLIP1-207ENST00000536634 MYD88Q99836 296 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 HTATIP2Q9BUP3 242 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 STK31Q9BXU1 1019 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 DUSP22Q9NRW4 184 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 BABAM1Q9NWV8 329 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 ZSCAN32Q9NX65 697 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 SERGEFQ9UGK8 458 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 PAXBP1Q9Y5B6 917 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 CDY1Q9Y6F8 540 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 WNT6Q9Y6F9 365 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 BDP1A6H8Y1 2624 aa6.37□□□□□ -1.39
CLIP1-207ENST00000536634 REV3LO60673 3130 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 BTBD19C9JJ37 291 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 H7C4K7 107 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 CHL1O00533 1208 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 TLR2O60603 784 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 ONECUT2O95948 504 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 FAM163BP0C2L3 166 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 ZNF37AP17032 561 aaPredicted RBP6.36□□□□□ -1.39
CLIP1-207ENST00000536634 MMP14P50281 582 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 C21orf58P58505 322 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 ARHGEF6Q15052 776 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 SLC9A4Q6AI14 798 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms