RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 ZDHHC5Q9C0B5 715 aa12.7□□□□□ -0.38
CCND1-202ENST00000535993 CD93Q9NPY3 652 aa12.7□□□□□ -0.38
CCND1-202ENST00000535993 DNAAF2Q9NVR5 837 aaKnown RBP12.7□□□□□ -0.38
CCND1-202ENST00000535993 RWDD2AQ9UIY3 292 aa12.7□□□□□ -0.38
CCND1-202ENST00000535993 TNRC6BQ9UPQ9 1833 aaKnown RBP12.69□□□□□ -0.38
CCND1-202ENST00000535993 A0A1B0GTW7 788 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 MSI1O43347 362 aaKnown RBP12.69□□□□□ -0.38
CCND1-202ENST00000535993 GNA14O95837 355 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 MBD3O95983 291 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 IGLV3-19P01714 112 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 PRKCHP24723 683 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 HLA-FP30511 346 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 SLC11A2P49281 568 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 RGS7P49802 495 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 SIM1P81133 766 aaPredicted RBP12.69□□□□□ -0.38
CCND1-202ENST00000535993 DPCR1Q3MIW9 517 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 FNDC3BQ53EP0 1204 aaKnown RBP12.69□□□□□ -0.38
CCND1-202ENST00000535993 MPP7Q5T2T1 576 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 TMEM215Q68D42 235 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 SMYD5Q6GMV2 418 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 PMF1Q6P1K2 205 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 MSANTD2Q6P1R3 559 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 AHI1Q8N157 1196 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 ZNF557Q8N988 423 aaPredicted RBP12.69□□□□□ -0.38
CCND1-202ENST00000535993 OR2T3Q8NH03 318 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 DNASE2BQ8WZ79 361 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 TFAP2BQ92481 460 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 DDX50Q9BQ39 737 aaKnown RBP12.69□□□□□ -0.38
CCND1-202ENST00000535993 ADAM33Q9BZ11 813 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 FBRSQ9HAH7 460 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCND1-202ENST00000535993 WASF3Q9UPY6 502 aa12.69□□□□□ -0.38
CCND1-202ENST00000535993 IGF2RP11717 2491 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 SPAARA0A1B0GVQ0 90 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 METTL12A8MUP2 240 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 KCNJ18B7U540 433 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 H0Y626 953 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 IRAK2O43187 625 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 SART1O43290 800 aaKnown RBP12.68□□□□□ -0.38
CCND1-202ENST00000535993 TRIM16O95361 564 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 LTFP02788 710 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 ATP5BP06576 529 aaKnown RBP12.68□□□□□ -0.38
CCND1-202ENST00000535993 PABPC1P11940 636 aaKnown RBP12.68□□□□□ -0.38
CCND1-202ENST00000535993 BRD2P25440 801 aaKnown RBP12.68□□□□□ -0.38
CCND1-202ENST00000535993 MAOBP27338 520 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 COPAP53621 1224 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 STX17P56962 302 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 GCNT1Q02742 428 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 DCAF12L1Q5VU92 463 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 CHST9Q7L1S5 443 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 TRIM59Q8IWR1 403 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.68□□□□□ -0.38
CCND1-202ENST00000535993 EHBP1Q8NDI1 1231 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 AZIN2Q96A70 460 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 SCNM1Q9BWG6 230 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 MIR1-1HGQ9H1L0 117 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 PCED1AQ9H1Q7 454 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 ABCB8Q9NUT2 735 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 GGA2Q9UJY4 613 aa12.68□□□□□ -0.38
CCND1-202ENST00000535993 CEP192Q8TEP8 1941 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 TYW5A2RUC4 315 aaKnown RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 TMEM8BA6NDV4 472 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 C1QTNF9BB2RNN3 333 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 RNF225M0QZC1 329 aaPredicted RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 PIK3R2O00459 728 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 BCAT2O15382 392 aaPredicted RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 TBL1XO60907 577 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 IGLV3-27P01718 113 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 DLDP09622 509 aaKnown RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 C1QTNF9P0C862 333 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 HLA-EP13747 358 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 CD59P13987 128 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 POLR2EP19388 210 aaKnown RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 SPINK2P20155 84 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 ERCC5P28715 1186 aaPredicted RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 TBX4P57082 545 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 ZBTB16Q05516 673 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 RING1Q06587 406 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 GRIK2Q13002 908 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 CAMK2GQ13555 558 aaPredicted RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 ZNF423Q2M1K9 1284 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 CT47A1Q5JQC4 288 aaPredicted RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 PIK3R6Q5UE93 754 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 MBLAC2Q68D91 279 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 IL27RAQ6UWB1 636 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 RRAGAQ7L523 313 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 KIAA0907Q7Z7F0 614 aaPredicted RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 ADIPOR2Q86V24 386 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 CACUL1Q86Y37 369 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 IRF2BP1Q8IU81 584 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 CCDC117Q8IWD4 279 aaPredicted RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 ZCCHC9Q8N567 271 aaKnown RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 KDF1Q8NAX2 398 aaPredicted RBP12.67□□□□□ -0.38
CCND1-202ENST00000535993 OR2I1PQ8NGU4 316 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 LMO3Q8TAP4 145 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 CYB5D2Q8WUJ1 264 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 KAT5Q92993 513 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 ZSWIM1Q9BR11 485 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 TRIM62Q9BVG3 475 aa12.67□□□□□ -0.38
CCND1-202ENST00000535993 LHX5Q9H2C1 402 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms