RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 ZP2Q05996 745 aa16.14■□□□□ 0.17
CNN1-202ENST00000535659 SCAPQ12770 1279 aa16.14■□□□□ 0.17
CNN1-202ENST00000535659 MS4A13Q5J8X5 152 aa16.14■□□□□ 0.17
CNN1-202ENST00000535659 TXNRD3NBQ6F5E7 133 aa16.14■□□□□ 0.17
CNN1-202ENST00000535659 NADSYN1Q6IA69 706 aa16.14■□□□□ 0.17
CNN1-202ENST00000535659 CYP4V2Q6ZWL3 525 aaPredicted RBP16.14■□□□□ 0.17
CNN1-202ENST00000535659 PSTKQ8IV42 348 aaKnown RBP16.14■□□□□ 0.17
CNN1-202ENST00000535659 SLC44A3Q8N4M1 653 aa16.14■□□□□ 0.17
CNN1-202ENST00000535659 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
CNN1-202ENST00000535659 DDX50Q9BQ39 737 aaKnown RBP16.14■□□□□ 0.17
CNN1-202ENST00000535659 FAM83CQ9BQN1 747 aa16.14■□□□□ 0.17
CNN1-202ENST00000535659 SIK2Q9H0K1 926 aa16.14■□□□□ 0.17
CNN1-202ENST00000535659 ZWILCHQ9H900 591 aa16.14■□□□□ 0.17
CNN1-202ENST00000535659 DUS2Q9NX74 493 aaKnown RBP16.14■□□□□ 0.17
CNN1-202ENST00000535659 ZKSCAN5Q9Y2L8 839 aa16.14■□□□□ 0.17
CNN1-202ENST00000535659 HELZP42694 1942 aaKnown RBP16.13■□□□□ 0.17
CNN1-202ENST00000535659 CHADO15335 359 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 KRT7P08729 469 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 RARAP10276 462 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 IFNAR2P48551 515 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 GRM2Q14416 872 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 EFHC2Q5JST6 749 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 KCNT1Q5JUK3 1230 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 LRRC38Q5VT99 294 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 PEX26Q7Z412 305 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 NT5DC3Q86UY8 548 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 RHOT1Q8IXI2 618 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 FAM217AQ8IXS0 508 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 CPXM2Q8N436 756 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 TRIM58Q8NG06 486 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 TEKT4Q8WW24 435 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 ALS2CR12Q96Q35 445 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 MAGEB5Q9BZ81 275 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.13■□□□□ 0.17
CNN1-202ENST00000535659 OR12D3Q9UGF7 316 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 AMFRQ9UKV5 643 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 HS3ST4Q9Y661 456 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 WNT6Q9Y6F9 365 aa16.13■□□□□ 0.17
CNN1-202ENST00000535659 C19orf67A6NJJ6 358 aa16.12■□□□□ 0.17
CNN1-202ENST00000535659 TNNT1P13805 278 aa16.12■□□□□ 0.17
CNN1-202ENST00000535659 GDI1P31150 447 aa16.12■□□□□ 0.17
CNN1-202ENST00000535659 DEKP35659 375 aaKnown RBP16.12■□□□□ 0.17
CNN1-202ENST00000535659 AUHQ13825 339 aaKnown RBP16.12■□□□□ 0.17
CNN1-202ENST00000535659 PDGFRLQ15198 375 aa16.12■□□□□ 0.17
CNN1-202ENST00000535659 ATP13A4Q4VNC1 1196 aa16.12■□□□□ 0.17
CNN1-202ENST00000535659 FAM133BQ5BKY9 247 aaKnown RBP16.12■□□□□ 0.17
CNN1-202ENST00000535659 PIK3R6Q5UE93 754 aa16.12■□□□□ 0.17
CNN1-202ENST00000535659 RAP1GAP2Q684P5 730 aa16.12■□□□□ 0.17
CNN1-202ENST00000535659 POLNQ7Z5Q5 900 aa16.12■□□□□ 0.17
CNN1-202ENST00000535659 C17orf53Q8N3J3 647 aaPredicted RBP16.12■□□□□ 0.17
CNN1-202ENST00000535659 CD101Q93033 1021 aa16.12■□□□□ 0.17
CNN1-202ENST00000535659 PRMT1Q99873 361 aaKnown RBP16.12■□□□□ 0.17
CNN1-202ENST00000535659 SNRNP25Q9BV90 132 aaKnown RBP16.12■□□□□ 0.17
CNN1-202ENST00000535659 AP4E1Q9UPM8 1137 aa16.12■□□□□ 0.17
CNN1-202ENST00000535659 KIF5CO60282 957 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 FTCDO95954 541 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 ASGR2P07307 311 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 TACR2P21452 398 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 SLC6A4P31645 630 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 CA9Q16790 459 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 SMTNL2Q2TAL5 461 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 EML3Q32P44 896 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 RFWD3Q6PCD5 774 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 CHSY1Q86X52 802 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 PYROXD2Q8N2H3 581 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 HSPH1Q92598 858 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 TMA16Q96EY4 203 aaKnown RBP16.11■□□□□ 0.17
CNN1-202ENST00000535659 ZFYVE19Q96K21 471 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 DHX35Q9H5Z1 703 aaKnown RBP16.11■□□□□ 0.17
CNN1-202ENST00000535659 BRD9Q9H8M2 597 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 GPATCH2LQ9NWQ4 482 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.11■□□□□ 0.17
CNN1-202ENST00000535659 SNX10Q9Y5X0 201 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 TTC28Q96AY4 2481 aa16.11■□□□□ 0.17
CNN1-202ENST00000535659 TRDMT1O14717 391 aaKnown RBP16.1■□□□□ 0.17
CNN1-202ENST00000535659 PSTPIP1O43586 416 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 TSPAN3O60637 253 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 L1CAMP32004 1257 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 GJC1P36383 396 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 NRG1Q02297 640 aaPredicted RBP16.1■□□□□ 0.17
CNN1-202ENST00000535659 TJAP1Q5JTD0 557 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 ZNF569Q5MCW4 686 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 TRIM68Q6AZZ1 485 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 FBXL22Q6P050 247 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 RHBDF2Q6PJF5 856 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 LRRC31Q6UY01 552 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 C14orf80Q86SX3 495 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 LGI2Q8N0V4 545 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 IRF7Q92985 503 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 ASIC4Q96FT7 647 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 EBF3Q9H4W6 596 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 SPHK2Q9NRA0 654 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 PCDHA3Q9Y5H8 950 aa16.1■□□□□ 0.17
CNN1-202ENST00000535659 CCDC66A2RUB6 948 aa16.09■□□□□ 0.17
CNN1-202ENST00000535659 DRGXA6NNA5 263 aa16.09■□□□□ 0.17
CNN1-202ENST00000535659 F5H5T6 163 aa16.09■□□□□ 0.17
CNN1-202ENST00000535659 FAM72CH0Y354 149 aa16.09■□□□□ 0.17
CNN1-202ENST00000535659 GFRA2O00451 464 aa16.09■□□□□ 0.17
CNN1-202ENST00000535659 SRGAP2O75044 1071 aa16.09■□□□□ 0.17
CNN1-202ENST00000535659 NFATC1O95644 943 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms