RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 ULBP1Q9BZM6 244 aa10.53□□□□□ -0.72
CLSTN3-203ENST00000534830 DCLK3Q9C098 648 aa10.53□□□□□ -0.72
CLSTN3-203ENST00000534830 MARCH2Q9P0N8 246 aa10.53□□□□□ -0.72
CLSTN3-203ENST00000534830 RASAL2Q9UJF2 1139 aa10.53□□□□□ -0.72
CLSTN3-203ENST00000534830 STOML2Q9UJZ1 356 aa10.53□□□□□ -0.72
CLSTN3-203ENST00000534830 CNTN6Q9UQ52 1028 aa10.53□□□□□ -0.72
CLSTN3-203ENST00000534830 ZNF462Q96JM2 2506 aa10.52□□□□□ -0.72
CLSTN3-203ENST00000534830 TENM4Q6N022 2769 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 GOLGA8CPA6NN73 597 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 SETSIPP0DME0 302 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 HOXB2P14652 356 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 RPL34P49207 117 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 ZNF132P52740 706 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 MFAP3P55082 362 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 SLC8A3P57103 927 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 LRMPQ12912 555 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 CNGA2Q16280 664 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 TRIM59Q8IWR1 403 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 EHBP1Q8NDI1 1231 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 UBA3Q8TBC4 463 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 IPO4Q8TEX9 1081 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 KAT5Q92993 513 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 PLD4Q96BZ4 506 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 NT5C1BQ96P26 610 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 CNGB3Q9NQW8 809 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 OLA1Q9NTK5 396 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 PLK2Q9NYY3 685 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 KIAA1522Q9P206 1035 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 THAP10Q9P2Z0 257 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 HESX1Q9UBX0 185 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 PCOLCE2Q9UKZ9 415 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 CLEC4EQ9ULY5 219 aa10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.52□□□□□ -0.73
CLSTN3-203ENST00000534830 SLC12A8A0AV02 714 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 BICDL2A1A5D9 508 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 FAM149AA5PLN7 773 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 YJEFN3A6XGL0 299 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 E7ENQ6 273 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 CAPN9O14815 690 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 CBFA2T3O75081 653 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 HMBSP08397 361 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 C7P10643 843 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 CD19P15391 556 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 GNSP15586 552 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 ITPKBP27987 946 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 WASP42768 502 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 DAOAP59103 153 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 GCNT1Q02742 428 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 ADIGQ0VDE8 80 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 KCNH2Q12809 1159 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 GEN1Q17RS7 908 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 CCDC40Q4G0X9 1142 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 BSPRYQ5W0U4 402 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 KLHL10Q6JEL2 608 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 PMF1Q6P1K2 205 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 MSANTD2Q6P1R3 559 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 TMEM270Q6UE05 265 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 DENND1CQ8IV53 801 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 FMNL3Q8IVF7 1028 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 SLC41A1Q8IVJ1 513 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 ARHGEF19Q8IW93 802 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 GALNT15Q8N3T1 639 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 KREMEN1Q96MU8 473 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 PRDM16Q9HAZ2 1276 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 LRRC4Q9HBW1 653 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 ABCC13Q9NSE7 274 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 CALCOCO1Q9P1Z2 691 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 SFMBT1Q9UHJ3 866 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 STRIP2Q9ULQ0 834 aa10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 HBS1LQ9Y450 684 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 MUC22E2RYF6 1773 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-203ENST00000534830 KNTC1P50748 2209 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 IGHV1OR15-9A0A0B4J2B8 117 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 WASH3PC4AMC7 463 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 NPC1O15118 1278 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 ZBTB24O43167 697 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 LATS1O95835 1130 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 GNA14O95837 355 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 IGLV3-27P01718 113 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 ATXN1LP0C7T5 689 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 NDUFV2P19404 249 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 MAOBP27338 520 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 HOXD9P28356 352 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 STX17P56962 302 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 GRIK2Q13002 908 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 PAK1Q13153 545 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 STILQ15468 1287 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 CCDC157Q569K6 752 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 SYCP2LQ5T4T6 812 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 TMEM215Q68D42 235 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 RSRC2Q7L4I2 434 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 KIAA0907Q7Z7F0 614 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 METTL3Q86U44 580 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 CHPFQ8IZ52 775 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 PPM1KQ8N3J5 372 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 PDCD7Q8N8D1 485 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 IRGQQ8WZA9 623 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 BHMTQ93088 406 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 HSFY1Q96LI6 401 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 MED15Q96RN5 788 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms