RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 SLC6A18Q96N87 628 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 KCTD10Q9H3F6 313 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 CYP3A43Q9HB55 503 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 ABCB8Q9NUT2 735 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 STRIP2Q9ULQ0 834 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 PLA2G4CQ9UP65 541 aa16.57■□□□□ 0.24
RPS3-220ENST00000534555 PLXNA2O75051 1894 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 FAM47DPA6NHR8 397 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 ENC1O14682 589 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 PAPSS1O43252 624 aaPredicted RBP16.56■□□□□ 0.24
RPS3-220ENST00000534555 KLRC4O43908 158 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 LDOC1O95751 146 aaPredicted RBP16.56■□□□□ 0.24
RPS3-220ENST00000534555 NR3C1P04150 777 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 WNT1P04628 370 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 C7P10643 843 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 SGSHP51688 502 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 BCAT1P54687 386 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 C21orf59P57076 290 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 SHBQ15464 509 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 TRIP4Q15650 581 aaPredicted RBP16.56■□□□□ 0.24
RPS3-220ENST00000534555 KIAA0895LQ68EN5 471 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 PIGZQ86VD9 579 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 PLD4Q96BZ4 506 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 NXPE2Q96DL1 559 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 CNDP2Q96KP4 475 aaKnown RBP16.56■□□□□ 0.24
RPS3-220ENST00000534555 EBF2Q9HAK2 575 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 MAGEF1Q9HAY2 307 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 SGK2Q9HBY8 427 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 SFMBT1Q9UHJ3 866 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 AK5Q9Y6K8 562 aa16.56■□□□□ 0.24
RPS3-220ENST00000534555 TP53BP1Q12888 1972 aaPredicted RBP16.56■□□□□ 0.24
RPS3-220ENST00000534555 TK2O00142 265 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 IKBKBO14920 756 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 VILLO15195 856 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 TRIM49P0CI25 452 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 TRIM49CP0CI26 452 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 GCLMP48507 274 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 PPP3CAQ08209 521 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 TARDBPQ13148 414 aaKnown RBP eCLIP16.55■□□□□ 0.24
RPS3-220ENST00000534555 INAVAQ3KP66 663 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 RAB41Q5JT25 222 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 C6orf118Q5T5N4 469 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 MBLAC2Q68D91 279 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 LRRC69Q6ZNQ3 347 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 KIAA0907Q7Z7F0 614 aaPredicted RBP16.55■□□□□ 0.24
RPS3-220ENST00000534555 FMNL3Q8IVF7 1028 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 ARHGAP18Q8N392 663 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 WFDC5Q8TCV5 224 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 WFIKKN2Q8TEU8 576 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 TMA16Q96EY4 203 aaKnown RBP16.55■□□□□ 0.24
RPS3-220ENST00000534555 ACE2Q9BYF1 805 aaPredicted RBP16.55■□□□□ 0.24
RPS3-220ENST00000534555 NIF3L1Q9GZT8 377 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 MMRN2Q9H8L6 949 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 SERGEFQ9UGK8 458 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 GGA2Q9UJY4 613 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 PCDHGA1Q9Y5H4 931 aa16.55■□□□□ 0.24
RPS3-220ENST00000534555 A0A1W2PPC4 97 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 WNT9AO14904 365 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 ITGAVP06756 1048 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 PABPC1P11940 636 aaKnown RBP16.54■□□□□ 0.24
RPS3-220ENST00000534555 VAMP7P51809 220 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 TKTL1P51854 596 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 RACK1P63244 317 aaKnown RBP16.54■□□□□ 0.24
RPS3-220ENST00000534555 ZBTB16Q05516 673 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 KMT5BQ4FZB7 885 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 BHLHA9Q7RTU4 235 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 EID2Q8N6I1 236 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 GANCQ8TET4 914 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 TMEM174Q8WUU8 243 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 FCRL3Q96P31 734 aaPredicted RBP16.54■□□□□ 0.24
RPS3-220ENST00000534555 ELF4Q99607 663 aaPredicted RBP16.54■□□□□ 0.24
RPS3-220ENST00000534555 ULBP1Q9BZM6 244 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 IMPG2Q9BZV3 1241 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 SERTAD1Q9UHV2 236 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 KNTC1P50748 2209 aa16.54■□□□□ 0.24
RPS3-220ENST00000534555 TULP2O00295 520 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 PDXKO00764 312 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 DFNA5O60443 496 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 RFPL3O75679 317 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 YEATS4O95619 227 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 DLDP09622 509 aaKnown RBP16.53■□□□□ 0.24
RPS3-220ENST00000534555 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
RPS3-220ENST00000534555 PLA2G2AP14555 144 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 ABCB4P21439 1286 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 CD70P32970 193 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 HNF1BP35680 557 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 HARS2P49590 506 aaKnown RBP16.53■□□□□ 0.24
RPS3-220ENST00000534555 ACADVLP49748 655 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 GALCP54803 685 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 TTC31Q49AM3 519 aaPredicted RBP16.53■□□□□ 0.24
RPS3-220ENST00000534555 HES3Q5TGS1 186 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 ZNF776Q68DI1 518 aaPredicted RBP16.53■□□□□ 0.24
RPS3-220ENST00000534555 AHI1Q8N157 1196 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 ZNF843Q8N446 348 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.53■□□□□ 0.243e-38■■□□□ 12.9
RPS3-220ENST00000534555 SLC4A11Q8NBS3 891 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 SAP25Q8TEE9 199 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 EDEM1Q92611 657 aa16.53■□□□□ 0.24
RPS3-220ENST00000534555 ZNF396Q96N95 335 aaPredicted RBP16.53■□□□□ 0.24
RPS3-220ENST00000534555 UBXN6Q9BZV1 441 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms