RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 MTERF3Q96E29 417 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 NAT9Q9BTE0 207 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 MRPL4Q9BYD3 311 aaKnown RBP10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 CYP4F12Q9HCS2 524 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 SAE1Q9UBE0 346 aaPredicted RBP10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 DNAJB4Q9UDY4 337 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 A0A1B0GVG6 124 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 CLRN2A0PK11 232 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 SEC24AO95486 1093 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 FAM86B2P0C5J1 330 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 LCP1P13796 627 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 ETFBP38117 255 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 GRIA3P42263 894 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 MARSP56192 900 aaKnown RBP10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 RAB15P59190 212 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 GTF2H3Q13889 308 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 TAF12Q16514 161 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 GALNT18Q6P9A2 607 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 MOXD1Q6UVY6 613 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 SV2AQ7L0J3 742 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 FASTKD5Q7L8L6 764 aaKnown RBP10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 SLFN11Q7Z7L1 901 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 STK32CQ86UX6 486 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 ULK4Q96C45 1275 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 PIF1Q9H611 641 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 CACYBPQ9HB71 228 aaKnown RBP10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 COG5Q9UP83 839 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 DAGLAQ9Y4D2 1042 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 PCDHA10Q9Y5I2 948 aa10.48□□□□□ -0.73
NCAPD3-214ENST00000534548 UBA6A0AVT1 1052 aaPredicted RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 FKBP9O95302 570 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 ADORA2BP29275 332 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 ABL2P42684 1182 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 PDK1Q15118 436 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 IL31Q6EBC2 164 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 FKBP9P1Q75LS8 142 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 LUZP2Q86TE4 346 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SFRP1Q8N474 314 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 RCN3Q96D15 328 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 WDR12Q9GZL7 423 aaKnown RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 NIF3L1Q9GZT8 377 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 STMN3Q9NZ72 180 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 CARD8Q9Y2G2 431 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 IGSF9BQ9UPX0 1349 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 GPR75-ASB3A0A0A6YYF3 556 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SPDYE2BA6NHP3 402 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 BIRC5O15392 142 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SPDYE6P0CI01 402 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 ERI1Q8IV48 349 aaKnown RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SUN5Q8TC36 379 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 MARK4Q96L34 752 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SLITRK1Q96PX8 696 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SLC7A8Q9UHI5 535 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 USP18Q9UMW8 372 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 WDR27A2RRH5 827 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 RNF103O00237 685 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 TPP1O14773 563 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 ALDH1B1P30837 517 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 PSME3P61289 254 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 LSM3P62310 102 aaKnown RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SNX17Q15036 470 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SH3D19Q5HYK7 790 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 ZC3H12BQ5HYM0 836 aaKnown RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 LRRC8DQ7L1W4 858 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 EMC1Q8N766 993 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 RP9Q8TA86 221 aaKnown RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 UBA3Q8TBC4 463 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 RTKNQ9BST9 563 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 PCDH12Q9NPG4 1184 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 VPS45Q9NRW7 570 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 IARS2Q9NSE4 1012 aaKnown RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 PPM1HQ9ULR3 514 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 ASTN1O14525 1302 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SPATA31A5Q5VU36 1347 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SPATA31A7Q8IWB4 1347 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SNPHO15079 494 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 PARNO95453 639 aaKnown RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 RARBP10826 455 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 RPL14P50914 215 aaKnown RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 ITGA7Q13683 1181 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 DPYSQ14117 519 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SHROOM1Q2M3G4 852 aaPredicted RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 ATP13A4Q4VNC1 1196 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 RALGPS1Q5JS13 557 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 ST13P5Q8NFI4 369 aaPredicted RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 TMC2Q8TDI7 906 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 HAS1Q92839 578 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 RNF145Q96MT1 663 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 THUMPD3Q9BV44 507 aaKnown RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 SARS2Q9NP81 518 aaKnown RBP10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 GPATCH2LQ9NWQ4 482 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 HACD3Q9P035 362 aa10.47□□□□□ -0.73
NCAPD3-214ENST00000534548 DGAT1O75907 488 aa10.46□□□□□ -0.73
NCAPD3-214ENST00000534548 MPOP05164 745 aa10.46□□□□□ -0.73
NCAPD3-214ENST00000534548 TSHRP16473 764 aa10.46□□□□□ -0.73
NCAPD3-214ENST00000534548 RPL22P35268 128 aaKnown RBP10.46□□□□□ -0.73
NCAPD3-214ENST00000534548 GP5P40197 560 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms