RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 PRR23BQ6ZRT6 265 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 PHLDB2Q86SQ0 1253 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 MFN1Q8IWA4 741 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 LGI2Q8N0V4 545 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 IL17RCQ8NAC3 791 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 ZBTB44Q8NCP5 570 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 IQCDQ96DY2 449 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 SLC39A13Q96H72 371 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 EDEM3Q9BZQ6 932 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 CIPCQ9C0C6 399 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 ZDHHC4Q9NPG8 344 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 TMEM51Q9NW97 253 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 IFNKQ9P0W0 207 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 SLC27A6Q9Y2P4 619 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 KCNU1A8MYU2 1149 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 AXIN1O15169 862 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 IGLV3-25P01717 112 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 CISD3P0C7P0 127 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 TDGF1P13385 188 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 HOXD9P28356 352 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-227ENST00000533909 NTSR1P30989 418 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 CNR2P34972 360 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 KIR2DL1P43626 348 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-227ENST00000533909 PITX1P78337 314 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-227ENST00000533909 DEUP1Q05D60 604 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 DMWDQ09019 674 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 CDH18Q13634 790 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
CAPN1-227ENST00000533909 SLC25A52Q3SY17 297 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 FAM133BQ5BKY9 247 aaKnown RBP13.87□□□□□ -0.19
CAPN1-227ENST00000533909 RABGAP1LQ5R372 815 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 MPP7Q5T2T1 576 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 PIK3R6Q5UE93 754 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 RAP1GAP2Q684P5 730 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 ANO7Q6IWH7 933 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 PGBD3Q8N328 593 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 CARNMT1Q8N4J0 409 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 RNF214Q8ND24 703 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 BAP1Q92560 729 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 NUCKS1Q9H1E3 243 aaKnown RBP13.87□□□□□ -0.19
CAPN1-227ENST00000533909 METTL5Q9NRN9 209 aaKnown RBP13.87□□□□□ -0.19
CAPN1-227ENST00000533909 POLR3BQ9NW08 1133 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-227ENST00000533909 STARD13Q9Y3M8 1113 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 KIAA1549LQ6ZVL6 1849 aa13.87□□□□□ -0.19
CAPN1-227ENST00000533909 EP300Q09472 2414 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-227ENST00000533909 PTPRZ1P23471 2315 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-227ENST00000533909 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 PRRT4C9JH25 899 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 H0Y626 953 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 SGK1O00141 431 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 TIMM44O43615 452 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 HOXB2P14652 356 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 DESP17661 470 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 TACR2P21452 398 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 SDC4P31431 198 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 SLC6A4P31645 630 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 WASP42768 502 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 CENPCQ03188 943 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 KLHL30Q0D2K2 578 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 SIM2Q14190 667 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-227ENST00000533909 STARD3Q14849 445 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 CRY1Q16526 586 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 FIGNQ5HY92 759 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 MS4A13Q5J8X5 152 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 EGFLAMQ63HQ2 1017 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 NADSYN1Q6IA69 706 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 DNAJC24Q6P3W2 148 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 IRF2BP2Q7Z5L9 587 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 VPS36Q86VN1 386 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 WDR5BQ86VZ2 330 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 WFIKKN2Q8TEU8 576 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 CPLX3Q8WVH0 158 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 NELL1Q92832 810 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 PCDHB18PQ96TA0 734 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 SELENOOQ9BVL4 669 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 WDCPQ9H6R7 721 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 ABCB8Q9NUT2 735 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 GGA2Q9UJY4 613 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 FBXO10Q9UK96 956 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 PLA2G4CQ9UP65 541 aa13.86□□□□□ -0.19
CAPN1-227ENST00000533909 SMG5Q9UPR3 1016 aaKnown RBP13.86□□□□□ -0.19
CAPN1-227ENST00000533909 CCDC163A0A0D9SF12 145 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 TCRBV21S2A2A0A5A6 115 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 TMCO5BA8MYB1 307 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 NPC1O15118 1278 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 SYNCRIPO60506 623 aaKnown RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 RPP40O75818 363 aaKnown RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 TPM1P09493 284 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 KRT3P12035 628 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 UNGP13051 313 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 PDGFRAP16234 1089 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 POLR2EP19388 210 aaKnown RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 FLT3P36888 993 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 SGSHP51688 502 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 RPS24P62847 133 aaKnown RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 GEN1Q17RS7 908 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 USP39Q53GS9 565 aaKnown RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 TDRD12Q587J7 1177 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms