RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
PACS1-214ENST00000533811 ARID1BQ8NFD5 2236 aaPredicted RBP9.66□□□□□ -0.86
PACS1-214ENST00000533811 A0A1W2PPC4 97 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 VILLO15195 856 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 PAPSS1O43252 624 aaPredicted RBP9.66□□□□□ -0.86
PACS1-214ENST00000533811 HLA-DRAP01903 254 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 WNT1P04628 370 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 IGHV4-34P06331 123 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 C1SP09871 688 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 CDK4P11802 303 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 HOXD9P28356 352 aaPredicted RBP9.66□□□□□ -0.86
PACS1-214ENST00000533811 HLA-FP30511 346 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 ACTN2P35609 894 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 ASPAP45381 313 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 DLG4P78352 724 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 ZNF394Q53GI3 561 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 MBLAC2Q68D91 279 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 NCEH1Q6PIU2 408 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 UNC13DQ70J99 1090 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 SPACA3Q8IXA5 215 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 TMEM176AQ96HP8 235 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 ORAI3Q9BRQ5 295 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 IMPG2Q9BZV3 1241 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 NRSN2Q9GZP1 204 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 TMEM245Q9H330 911 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 FBRSQ9HAH7 460 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 PNPLA8Q9NP80 782 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 GDF3Q9NR23 364 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 KBTBD4Q9NVX7 518 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 FBXL12Q9NXK8 326 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 CGNQ9P2M7 1197 aaKnown RBP9.66□□□□□ -0.86
PACS1-214ENST00000533811 SUN2Q9UH99 717 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 GGA2Q9UJY4 613 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 TDRD6O60522 2096 aaKnown RBP9.66□□□□□ -0.86
PACS1-214ENST00000533811 NAV2Q8IVL1 2488 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 KALRNO60229 2985 aa9.66□□□□□ -0.86
PACS1-214ENST00000533811 A0A1W2PP55 124 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 ASS1P00966 412 aaKnown RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 RPN1P04843 607 aaKnown RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 PABPC1P11940 636 aaKnown RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 POLR2EP19388 210 aaKnown RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 PDCP20941 246 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 GLDCP23378 1020 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 CD38P28907 300 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 EPHA8P29322 1005 aaPredicted RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 HARS2P49590 506 aaKnown RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 YWHAGP61981 247 aaKnown RBP eCLIP9.65□□□□□ -0.86
PACS1-214ENST00000533811 TLE3Q04726 772 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 ZBTB16Q05516 673 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 KCNH2Q12809 1159 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 BNIP3Q12983 259 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 RTP5Q14D33 572 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 SLC39A14Q15043 492 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 SHBQ15464 509 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 E2F4Q16254 413 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 KNOP1Q1ED39 458 aaKnown RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 PPP1R26Q5T8A7 1209 aaPredicted RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 FBXL19Q6PCT2 694 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 KDM7AQ6ZMT4 941 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 FMNL3Q8IVF7 1028 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 DHX40Q8IX18 779 aaKnown RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 C12orf56Q8IXR9 622 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 AHI1Q8N157 1196 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 ARHGAP18Q8N392 663 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 ZNF276Q8N554 614 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 SAP25Q8TEE9 199 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 TAF4BQ92750 862 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 GOLGA1Q92805 767 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 PLD4Q96BZ4 506 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 TMA16Q96EY4 203 aaKnown RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 DUSP16Q9BY84 665 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 DNAI2Q9GZS0 605 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 PABPC3Q9H361 631 aaKnown RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 CUEDC2Q9H467 287 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 MMRN2Q9H8L6 949 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 SERGEFQ9UGK8 458 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 CLCA2Q9UQC9 943 aa9.65□□□□□ -0.86
PACS1-214ENST00000533811 NYNRINQ9P2P1 1898 aaKnown RBP9.65□□□□□ -0.86
PACS1-214ENST00000533811 DOCK9Q9BZ29 2069 aa9.65□□□□□ -0.87
PACS1-214ENST00000533811 MAST4O15021 2626 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 CAPN8A6NHC0 703 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 LRRC72A6NJI9 287 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 ERVH48-1M5A8F1 160 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 MID1O15344 667 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 YKT6O15498 198 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 RNASEH1O60930 286 aaKnown RBP9.64□□□□□ -0.87
PACS1-214ENST00000533811 SIN3BO75182 1162 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 RNASEH2AO75792 299 aaKnown RBP9.64□□□□□ -0.87
PACS1-214ENST00000533811 ATP5BP06576 529 aaKnown RBP9.64□□□□□ -0.87
PACS1-214ENST00000533811 DLDP09622 509 aaKnown RBP9.64□□□□□ -0.87
PACS1-214ENST00000533811 CD70P32970 193 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 AFMP43652 599 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 ARRB1P49407 418 aaPredicted RBP9.64□□□□□ -0.87
PACS1-214ENST00000533811 GALCP54803 685 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 ST8SIA6P61647 398 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 INCA1Q0VD86 236 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 TBC1D25Q3MII6 688 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 ZACNQ401N2 412 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 ARHGAP40Q5TG30 622 aa9.64□□□□□ -0.87
PACS1-214ENST00000533811 BROXQ5VW32 411 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms