RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 CLEC20AQ6ZU45 233 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 SV2BQ7L1I2 683 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 DENND1CQ8IV53 801 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 TRIM4Q9C037 500 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 SGK2Q9HBY8 427 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 RP1P56715 2156 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 UNC79Q9P2D8 2635 aa12.88□□□□□ -0.35
SVIP-205ENST00000533774 FAM47DPA6NHR8 397 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 CLIC2O15247 247 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 VNN1O95497 513 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 MT-CO3P00414 261 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 MPOP05164 745 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 CKMT2P17540 419 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 HOXD9P28356 352 aaPredicted RBP12.87□□□□□ -0.35
SVIP-205ENST00000533774 ADORA2BP29275 332 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 CHKAP35790 457 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 PCBP4P57723 403 aaKnown RBP12.87□□□□□ -0.35
SVIP-205ENST00000533774 TRPC3Q13507 836 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 COLEC12Q5KU26 742 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 KIAA1614Q5VZ46 1190 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 NCEH1Q6PIU2 408 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 ADIPOR2Q86V24 386 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 SPATS2Q86XZ4 545 aaKnown RBP12.87□□□□□ -0.35
SVIP-205ENST00000533774 FAM217AQ8IXS0 508 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 CRYBG2Q8N1P7 616 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 SNRNP27Q8WVK2 155 aaKnown RBP12.87□□□□□ -0.35
SVIP-205ENST00000533774 MED8Q96G25 268 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 TNIP3Q96KP6 325 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 CLIC6Q96NY7 704 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 CAAP1Q9H8G2 361 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 VRTNQ9H8Y1 702 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.87□□□□□ -0.35
SVIP-205ENST00000533774 RASAL2Q9UJF2 1139 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 NAGPAQ9UK23 515 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 ZNF510Q9Y2H8 683 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 NBPF19A0A087WUL8 3843 aa12.87□□□□□ -0.35
SVIP-205ENST00000533774 TIMM44O43615 452 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 DNTTP04053 509 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 ACP1P24666 158 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 CD38P28907 300 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 ATICP31939 592 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 CSRP3P50461 194 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 CYP2J2P51589 502 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 KIF11P52732 1056 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 NDST1P52848 882 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 ZBTB16Q05516 673 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 EFEMP1Q12805 493 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 ILKQ13418 452 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 BMT2Q1RMZ1 405 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 PROX2Q3B8N5 592 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 RRAGBQ5VZM2 374 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 CHST9Q7L1S5 443 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 KIAA0907Q7Z7F0 614 aaPredicted RBP12.86□□□□□ -0.35
SVIP-205ENST00000533774 DHX40Q8IX18 779 aaKnown RBP12.86□□□□□ -0.35
SVIP-205ENST00000533774 PLPP6Q8IY26 295 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 CPXM2Q8N436 756 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 ZNF276Q8N554 614 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 WFDC5Q8TCV5 224 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 DDI1Q8WTU0 396 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 SYAP1Q96A49 352 aaPredicted RBP12.86□□□□□ -0.35
SVIP-205ENST00000533774 ZNF578Q96N58 590 aaPredicted RBP12.86□□□□□ -0.35
SVIP-205ENST00000533774 TWNKQ96RR1 684 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 SLC2A11Q9BYW1 496 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 PABPC3Q9H361 631 aaKnown RBP12.86□□□□□ -0.35
SVIP-205ENST00000533774 AASDHPPTQ9NRN7 309 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 AGPAT3Q9NRZ7 376 aa12.86□□□□□ -0.35
SVIP-205ENST00000533774 USP9XQ93008 2570 aaPredicted RBP12.85□□□□□ -0.35
SVIP-205ENST00000533774 TLN1Q9Y490 2541 aaKnown RBP12.85□□□□□ -0.35
SVIP-205ENST00000533774 TRIM38O00635 465 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 KLK10O43240 276 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 FAM200BP0CF97 657 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 RXRGP48443 463 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 SGSHP51688 502 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 NXPH1P58417 271 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 ARID5AQ03989 594 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 EHHADHQ08426 723 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 VAC14Q08AM6 782 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 ZNF699Q32M78 642 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 ZNF667Q5HYK9 610 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 BROXQ5VW32 411 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 CDCP2Q5VXM1 449 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 ZNF776Q68DI1 518 aaPredicted RBP12.85□□□□□ -0.35
SVIP-205ENST00000533774 EPM2AIP1Q7L775 607 aaPredicted RBP12.85□□□□□ -0.35
SVIP-205ENST00000533774 PRICKLE2Q7Z3G6 844 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 MYO19Q96H55 970 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 RSPH9Q9H1X1 276 aaPredicted RBP12.85□□□□□ -0.35
SVIP-205ENST00000533774 NEUROG2Q9H2A3 272 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 KIAA1586Q9HCI6 787 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 ASCL3Q9NQ33 180 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 GDF3Q9NR23 364 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 ABCB8Q9NUT2 735 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 IL17BQ9UHF5 180 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 ADAMTS1Q9UHI8 967 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 FBXO2Q9UK22 296 aaPredicted RBP12.85□□□□□ -0.35
SVIP-205ENST00000533774 KIF3AQ9Y496 699 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 PCDHA5Q9Y5H7 936 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 CLIC4Q9Y696 253 aa12.85□□□□□ -0.35
SVIP-205ENST00000533774 A0A1W2PNU3 283 aaPredicted RBP12.84□□□□□ -0.35
SVIP-205ENST00000533774 A0A1W2PP55 124 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms