RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 XPO7Q9UIA9 1087 aaKnown RBP13.92□□□□□ -0.18
TRAPPC4-214ENST00000533632 RAB21Q9UL25 225 aa13.92□□□□□ -0.18
TRAPPC4-214ENST00000533632 TLR6Q9Y2C9 796 aa13.92□□□□□ -0.18
TRAPPC4-214ENST00000533632 CPQQ9Y646 472 aa13.92□□□□□ -0.18
TRAPPC4-214ENST00000533632 CUL9Q8IWT3 2517 aa13.92□□□□□ -0.18
TRAPPC4-214ENST00000533632 TRAV19A0A0A6YYK7 116 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 GREM1O60565 184 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 STC2O76061 302 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 FCARP24071 287 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 DDX6P26196 483 aaKnown RBP eCLIP13.91□□□□□ -0.183e-7■□□□□ 9.5
TRAPPC4-214ENST00000533632 NNTQ13423 1086 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 BRD3Q15059 726 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 TRIP4Q15650 581 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 SMTNL2Q2TAL5 461 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 ATP13A4Q4VNC1 1196 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 ARHGAP15Q53QZ3 475 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 TADA2BQ86TJ2 420 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 USP13Q92995 863 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 UHRF1Q96T88 793 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 PARD6BQ9BYG5 372 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 ANKZF1Q9H8Y5 726 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 USP18Q9UMW8 372 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 NR2E1Q9Y466 385 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 KCNU1A8MYU2 1149 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 SCAMP3O14828 347 aaKnown RBP13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 PSTPIP1O43586 416 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 RNF8O76064 485 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 KLKB1P03952 638 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 TBX4P57082 545 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 KCNT1Q5JUK3 1230 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 SEL1L2Q5TEA6 688 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 WDR93Q6P2C0 686 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 SCYL2Q6P3W7 929 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 GJD3Q8N144 294 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 ZSCAN18Q8TBC5 510 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 ALG3Q92685 438 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 FGF14Q92915 247 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 RSPRY1Q96DX4 576 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 ZWILCHQ9H900 591 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 KLHL11Q9NVR0 708 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 GPATCH2LQ9NWQ4 482 aa13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 HBS1LQ9Y450 684 aaKnown RBP13.91□□□□□ -0.18
TRAPPC4-214ENST00000533632 CCDC151A5D8V7 595 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 ANHXE9PGG2 379 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 F9P00740 461 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 IRF1P10914 325 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 PFKLP17858 780 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 GBP1P32455 592 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 GJC1P36383 396 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 SSR1P43307 286 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 C2orf54Q08AI8 447 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 CA9Q16790 459 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 FAM78AQ5JUQ0 283 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 ARTNQ5T4W7 220 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 LRRC38Q5VT99 294 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 ARID3BQ8IVW6 561 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 RHOT1Q8IXI2 618 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 LRRC3BQ96PB8 259 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 RPP25Q9BUL9 199 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 SNRNP25Q9BV90 132 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 COL25A1Q9BXS0 654 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 TKTL2Q9H0I9 626 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 ARHGEF38Q9NXL2 777 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 GDE1Q9NZC3 331 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 LIMD1Q9UGP4 676 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 ARHGAP26Q9UNA1 814 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 SNX10Q9Y5X0 201 aa13.9□□□□□ -0.18
TRAPPC4-214ENST00000533632 GOLGA6L10A0A0M3HER8 536 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 SOBPA7XYQ1 873 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 PRPSAP2O60256 369 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 ASGR2P07307 311 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 RARAP10276 462 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 CCR1P32246 355 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 ADRA1BP35368 520 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 AVPR1AP37288 418 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 GGCXP38435 758 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 RING1Q06587 406 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 HTR4Q13639 388 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 PPP2R5DQ14738 602 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 DCAF12L1Q5VU92 463 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 PARM1Q6UWI2 310 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 RNF135Q8IUD6 432 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 PYROXD2Q8N2H3 581 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 HNRNPLLQ8WVV9 542 aaKnown RBP13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 RSAD2Q8WXG1 361 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 ASB16Q96NS5 453 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 WDCPQ9H6R7 721 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 RBM12Q9NTZ6 932 aaKnown RBP13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 FZD10Q9ULW2 581 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 ZFP37Q9Y6Q3 630 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 COL4A2P08572 1712 aa13.89□□□□□ -0.19
TRAPPC4-214ENST00000533632 LEFTY2O00292 366 aa13.88□□□□□ -0.19
TRAPPC4-214ENST00000533632 KRIT1O00522 736 aa13.88□□□□□ -0.19
TRAPPC4-214ENST00000533632 ERLIN1O75477 346 aa13.88□□□□□ -0.19
TRAPPC4-214ENST00000533632 MOCS2O96007 188 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC4-214ENST00000533632 FGGP02679 453 aa13.88□□□□□ -0.19
TRAPPC4-214ENST00000533632 RHOXF2BP0C7M4 288 aa13.88□□□□□ -0.19
TRAPPC4-214ENST00000533632 VIPR2P41587 438 aa13.88□□□□□ -0.19
TRAPPC4-214ENST00000533632 COG7P83436 770 aa13.88□□□□□ -0.19
TRAPPC4-214ENST00000533632 SCAPQ12770 1279 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms