RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ABCB8Q9NUT2 735 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 DACH1Q9UI36 760 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 TLR6Q9Y2C9 796 aa16.06■□□□□ 0.16
CPSF1-211ENST00000533492 E5RJQ4 531 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 FYNP06241 537 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 ATP5BP06576 529 aaKnown RBP16.05■□□□□ 0.16
CPSF1-211ENST00000533492 ACADMP11310 421 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 PABPC1P11940 636 aaKnown RBP16.05■□□□□ 0.16
CPSF1-211ENST00000533492 PON1P27169 355 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 ANP32AP39687 249 aaKnown RBP16.05■□□□□ 0.16
CPSF1-211ENST00000533492 UAP1L1Q3KQV9 507 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 FNDC3BQ53EP0 1204 aaKnown RBP16.05■□□□□ 0.16
CPSF1-211ENST00000533492 MPP7Q5T2T1 576 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 SYCP2LQ5T4T6 812 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 SLC23A3Q6PIS1 610 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 RABEPKQ7Z6M1 372 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 TMEM110Q86TL2 294 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 METTL3Q86U44 580 aaKnown RBP16.05■□□□□ 0.16
CPSF1-211ENST00000533492 CCDC117Q8IWD4 279 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-211ENST00000533492 AHI1Q8N157 1196 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 ZNF557Q8N988 423 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-211ENST00000533492 ADAM32Q8TC27 787 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 FOXJ1Q92949 421 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 HSPA12BQ96MM6 686 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 MKRN2Q9H000 416 aaKnown RBP16.05■□□□□ 0.16
CPSF1-211ENST00000533492 NUP62CLQ9H1M0 184 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 ITM2CQ9NQX7 267 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 STIM2Q9P246 746 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 GGA2Q9UJY4 613 aa16.05■□□□□ 0.16
CPSF1-211ENST00000533492 LAMA1P25391 3075 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 BECN2A8MW95 431 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 CDX4O14627 284 aaPredicted RBP16.04■□□□□ 0.16
CPSF1-211ENST00000533492 PAPSS1O43252 624 aaPredicted RBP16.04■□□□□ 0.16
CPSF1-211ENST00000533492 KCNK5O95279 499 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 APOEP02649 317 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 PRKCSHP14314 528 aaPredicted RBP16.04■□□□□ 0.16
CPSF1-211ENST00000533492 PRKCHP24723 683 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 CD6P30203 668 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 SLC6A4P31645 630 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 MAPK8P45983 427 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 SGSHP51688 502 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 ATXN3P54252 364 aaPredicted RBP16.04■□□□□ 0.16
CPSF1-211ENST00000533492 YWHAZP63104 245 aaKnown RBP16.04■□□□□ 0.16
CPSF1-211ENST00000533492 APBA1Q02410 837 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 PTK2Q05397 1052 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 GFPT1Q06210 699 aaPredicted RBP16.04■□□□□ 0.16
CPSF1-211ENST00000533492 NNTQ13423 1086 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 MAN2A1Q16706 1144 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 FAM133BQ5BKY9 247 aaKnown RBP16.04■□□□□ 0.16
CPSF1-211ENST00000533492 SYPL2Q5VXT5 272 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 BEND5Q7L4P6 421 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 HJURPQ8NCD3 748 aaPredicted RBP16.04■□□□□ 0.16
CPSF1-211ENST00000533492 CYB5D2Q8WUJ1 264 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 SHC3Q92529 594 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 ZNF419Q96HQ0 510 aaPredicted RBP16.04■□□□□ 0.16
CPSF1-211ENST00000533492 FCRL2Q96LA5 508 aaPredicted RBP16.04■□□□□ 0.16
CPSF1-211ENST00000533492 POPDC2Q9HBU9 364 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 CD93Q9NPY3 652 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 SLC6A14Q9UN76 642 aa16.04■□□□□ 0.16
CPSF1-211ENST00000533492 PES1O00541 588 aaKnown RBP16.03■□□□□ 0.16
CPSF1-211ENST00000533492 MOCS2O96007 188 aaPredicted RBP16.03■□□□□ 0.16
CPSF1-211ENST00000533492 HLA-EP13747 358 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 ENGP17813 658 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 POLR2EP19388 210 aaKnown RBP16.03■□□□□ 0.16
CPSF1-211ENST00000533492 ERCC5P28715 1186 aaPredicted RBP16.03■□□□□ 0.16
CPSF1-211ENST00000533492 OXTRP30559 389 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 NOVA1P51513 510 aaKnown RBP16.03■□□□□ 0.16
CPSF1-211ENST00000533492 PDCLQ13371 301 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 DPCR1Q3MIW9 517 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 WDR45BQ5MNZ6 344 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 N4BP2L1Q5TBK1 243 aaPredicted RBP16.03■□□□□ 0.16
CPSF1-211ENST00000533492 PEAR1Q5VY43 1037 aaPredicted RBP16.03■□□□□ 0.16
CPSF1-211ENST00000533492 MBLAC2Q68D91 279 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 NADSYN1Q6IA69 706 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 PSAPL1Q6NUJ1 521 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 TAC4Q86UU9 113 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 ADIPOR2Q86V24 386 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 SLC41A1Q8IVJ1 513 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 MFN1Q8IWA4 741 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.03■□□□□ 0.16
CPSF1-211ENST00000533492 TOE1Q96GM8 510 aaKnown RBP16.03■□□□□ 0.16
CPSF1-211ENST00000533492 SLC39A13Q96H72 371 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 NOX5Q96PH1 765 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 NDST4Q9H3R1 872 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 WSB2Q9NYS7 404 aaPredicted RBP16.03■□□□□ 0.16
CPSF1-211ENST00000533492 SLC12A6Q9UHW9 1150 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 CYTH4Q9UIA0 394 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 DNAJC12Q9UKB3 198 aa16.03■□□□□ 0.16
CPSF1-211ENST00000533492 TNRC6BQ9UPQ9 1833 aaKnown RBP16.03■□□□□ 0.16
CPSF1-211ENST00000533492 TRUB2O95900 331 aaKnown RBP16.02■□□□□ 0.16
CPSF1-211ENST00000533492 SERPINF2P08697 491 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 DLDP09622 509 aaKnown RBP16.02■□□□□ 0.16
CPSF1-211ENST00000533492 GNSP15586 552 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 CD70P32970 193 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 KRT9P35527 623 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 TPMTP51580 245 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 SNX16P57768 344 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 VWA3BQ502W6 1294 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 HSP90AA4PQ58FG1 418 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 DCAF6Q58WW2 860 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms