RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 ITGA11Q9UKX5 1188 aa15.33■□□□□ 0.04
NXF1-213ENST00000532297 DNAJC16Q9Y2G8 782 aa15.33■□□□□ 0.04
NXF1-213ENST00000532297 TTLL3Q9Y4R7 772 aa15.33■□□□□ 0.04
NXF1-213ENST00000532297 MYOCOSA0A1B0GUC4 107 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 OGTO15294 1046 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 KRT7P08729 469 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 SERPINB8P50452 374 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 EMP3P54852 163 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 FAM102AQ5T9C2 384 aaPredicted RBP15.32■□□□□ 0.04
NXF1-213ENST00000532297 BBS12Q6ZW61 710 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 RSPH3Q86UC2 560 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 KBTBD6Q86V97 674 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 FBXW8Q8N3Y1 598 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 PIWIL2Q8TC59 973 aaKnown RBP15.32■□□□□ 0.04
NXF1-213ENST00000532297 SENP6Q9GZR1 1112 aaPredicted RBP15.32■□□□□ 0.04
NXF1-213ENST00000532297 TMEM134Q9H6X4 195 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 PIH1D1Q9NWS0 290 aaKnown RBP15.32■□□□□ 0.04
NXF1-213ENST00000532297 TNFAIP8O95379 198 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 SRGAP2BP0DMP2 458 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 CYP3A5P20815 502 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 OAZ1P54368 228 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 GK3PQ14409 553 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 KRT81Q14533 505 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 HADHQ16836 314 aaKnown RBP15.32■□□□□ 0.04
NXF1-213ENST00000532297 ZNF513Q8N8E2 541 aaPredicted RBP15.32■□□□□ 0.04
NXF1-213ENST00000532297 C12orf29Q8N999 325 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 C1orf127Q8N9H9 656 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 KCNN1Q92952 543 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 ZNF778Q96MU6 729 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 NIFKQ9BYG3 293 aaKnown RBP15.32■□□□□ 0.04
NXF1-213ENST00000532297 GGA3Q9NZ52 723 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 SLC17A6Q9P2U8 582 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 SSC5DA1L4H1 1573 aa15.32■□□□□ 0.04
NXF1-213ENST00000532297 ITM2AO43736 263 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 MAFO75444 373 aaPredicted RBP15.31■□□□□ 0.04
NXF1-213ENST00000532297 MICAL2O94851 1124 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 CRTAMO95727 393 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 F7P08709 466 aaPredicted RBP15.31■□□□□ 0.04
NXF1-213ENST00000532297 ITGAXP20702 1163 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 POLR2BP30876 1174 aaKnown RBP15.31■□□□□ 0.04
NXF1-213ENST00000532297 SH3D19Q5HYK7 790 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 TSHZ1Q6ZSZ6 1077 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 DIS3LQ8TF46 1054 aaKnown RBP15.31■□□□□ 0.04
NXF1-213ENST00000532297 FRMD8P1Q9BZ68 369 aaPredicted RBP15.31■□□□□ 0.04
NXF1-213ENST00000532297 AS3MTQ9HBK9 375 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 ZNF180Q9UJW8 692 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 HEY1Q9Y5J3 304 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 BIRC5O15392 142 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 HCRTO43612 131 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 TRMUO75648 421 aaKnown RBP15.31■□□□□ 0.04
NXF1-213ENST00000532297 ZMPSTE24O75844 475 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 C1QAP02745 245 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 SLC5A2P31639 672 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 CDH6P55285 790 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 MYBPC1Q00872 1141 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 MROH9Q5TGP6 573 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 MAP1SQ66K74 1059 aaPredicted RBP15.31■□□□□ 0.04
NXF1-213ENST00000532297 DARS2Q6PI48 645 aaKnown RBP15.31■□□□□ 0.04
NXF1-213ENST00000532297 FBXO16Q8IX29 292 aaPredicted RBP15.31■□□□□ 0.04
NXF1-213ENST00000532297 PQLC1Q8N2U9 271 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 SLC4A11Q8NBS3 891 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 FAF2Q96CS3 445 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 MAML3Q96JK9 1138 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 IFT122Q9HBG6 1241 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 PNPLA8Q9NP80 782 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 PLK2Q9NYY3 685 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 ZC3H7BQ9UGR2 993 aaKnown RBP15.31■□□□□ 0.04
NXF1-213ENST00000532297 PCDHGC3Q9UN70 934 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 EFR3BQ9Y2G0 817 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 AP4B1Q9Y6B7 739 aa15.31■□□□□ 0.04
NXF1-213ENST00000532297 MYO18AQ92614 2054 aaKnown RBP15.31■□□□□ 0.04
NXF1-213ENST00000532297 IGKV6D-21A0A0A0MT36 114 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 GPR25O00155 361 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 MCF2LO15068 1137 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 TFE3P19532 575 aaPredicted RBP15.3■□□□□ 0.04
NXF1-213ENST00000532297 CDH5P33151 784 aaPredicted RBP15.3■□□□□ 0.04
NXF1-213ENST00000532297 GMPRP36959 345 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 CA9Q16790 459 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 JADE1Q6IE81 842 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 SCYL2Q6P3W7 929 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 ZPBP2Q6X784 338 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 TRIM67Q6ZTA4 783 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 FRMD7Q6ZUT3 714 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 ARCQ7LC44 396 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 PPP1R14BQ96C90 147 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 CMTM5Q96DZ9 223 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 PGLYRP2Q96PD5 576 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 USP18Q9UMW8 372 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 BRCA2P51587 3418 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 H3BSA7 217 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 KRT38O76015 456 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 NCF2P19878 526 aaPredicted RBP15.3■□□□□ 0.04
NXF1-213ENST00000532297 L1CAMP32004 1257 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 ATXN1P54253 815 aaKnown RBP15.3■□□□□ 0.04
NXF1-213ENST00000532297 HDAC4P56524 1084 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 PPIDQ08752 370 aaKnown RBP15.3■□□□□ 0.04
NXF1-213ENST00000532297 CBX3Q13185 183 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 FASTKD1Q53R41 847 aaKnown RBP15.3■□□□□ 0.04
NXF1-213ENST00000532297 ATF7IP2Q5U623 682 aa15.3■□□□□ 0.04
NXF1-213ENST00000532297 CYP4V2Q6ZWL3 525 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms