RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 JRKLQ9Y4A0 524 aa18.28■□□□□ 0.52
CTSB-222ENST00000531551 E2F8A0AVK6 867 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 CCDC66A2RUB6 948 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 PI4K2BG5E9Z4 385 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 TRDMT1O14717 391 aaKnown RBP18.27■□□□□ 0.52
CTSB-222ENST00000531551 GREM1O60565 184 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 KRT1P04264 644 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 CDH6P55285 790 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 MS4A13Q5J8X5 152 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 PIK3R6Q5UE93 754 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 LRRC38Q5VT99 294 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 POLNQ7Z5Q5 900 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 TEKT4Q8WW24 435 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 PSMB7Q99436 277 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 OR12D3Q9UGF7 316 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 ZNF510Q9Y2H8 683 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 PCDHA3Q9Y5H8 950 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 WNT6Q9Y6F9 365 aa18.27■□□□□ 0.52
CTSB-222ENST00000531551 MIF4GDA9UHW6 222 aaKnown RBP18.26■□□□□ 0.51
CTSB-222ENST00000531551 TSPAN3O60637 253 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 CTNNA2P26232 953 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 VCPP55072 806 aaKnown RBP18.26■□□□□ 0.51
CTSB-222ENST00000531551 SCAPQ12770 1279 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 GRM2Q14416 872 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 NADSYN1Q6IA69 706 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 RFWD3Q6PCD5 774 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 VITQ6UXI7 678 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 SYT10Q6XYQ8 523 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 Q6ZNB5 142 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 MTSS1LQ765P7 747 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 YAF2Q8IY57 180 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 E2F7Q96AV8 911 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 RNF25Q96BH1 459 aaPredicted RBP18.26■□□□□ 0.51
CTSB-222ENST00000531551 HES6Q96HZ4 224 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 KCTD15Q96SI1 283 aaPredicted RBP18.26■□□□□ 0.51
CTSB-222ENST00000531551 PLA2G2FQ9BZM2 168 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 DDX56Q9NY93 547 aaKnown RBP18.26■□□□□ 0.51
CTSB-222ENST00000531551 DNAI1Q9UI46 699 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 VANGL2Q9ULK5 521 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 NUMBLQ9Y6R0 609 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 DENND4CQ5VZ89 1909 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 LRRD1A4D1F6 860 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 FAM72CH0Y354 149 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 ATP1A1P05023 1023 aaKnown RBP18.26■□□□□ 0.51
CTSB-222ENST00000531551 TCF3P15923 654 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 TACR2P21452 398 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 RWDD2BP57060 319 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 MTA1Q13330 715 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 AUHQ13825 339 aaKnown RBP18.26■□□□□ 0.51
CTSB-222ENST00000531551 ADGRF1Q5T601 910 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 FAM72AQ5TYM5 149 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 FAM72DQ6L9T8 149 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 FAM72BQ86X60 149 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 CCDC50Q8IVM0 306 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 RSAD2Q8WXG1 361 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 RAPGEF5Q92565 580 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 AZIN2Q96A70 460 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 ELSPBP1Q96BH3 223 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 ZFYVE19Q96K21 471 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 RPP25Q9BUL9 199 aaKnown RBP18.26■□□□□ 0.51
CTSB-222ENST00000531551 CALN1Q9BXU9 219 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 LINC00597Q9H2U6 94 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 THG1LQ9NWX6 298 aaKnown RBP18.26■□□□□ 0.51
CTSB-222ENST00000531551 LIMD1Q9UGP4 676 aa18.26■□□□□ 0.51
CTSB-222ENST00000531551 F5H5T6 163 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 DDX3YO15523 660 aaKnown RBP18.25■□□□□ 0.51
CTSB-222ENST00000531551 CD48P09326 243 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 SLC6A4P31645 630 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 IFNAR2P48551 515 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 MLLT6P55198 1093 aaPredicted RBP18.25■□□□□ 0.51
CTSB-222ENST00000531551 ETF1P62495 437 aaKnown RBP18.25■□□□□ 0.51
CTSB-222ENST00000531551 LLGL1Q15334 1064 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 FAM133BQ5BKY9 247 aaKnown RBP18.25■□□□□ 0.51
CTSB-222ENST00000531551 TRIM68Q6AZZ1 485 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 RWDD4Q6NW29 188 aaKnown RBP18.25■□□□□ 0.51
CTSB-222ENST00000531551 NYAP1Q6ZVC0 841 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 C14orf80Q86SX3 495 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 PSTKQ8IV42 348 aaKnown RBP18.25■□□□□ 0.51
CTSB-222ENST00000531551 LGI2Q8N0V4 545 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 PLCD3Q8N3E9 789 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 BHMTQ93088 406 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 DDX50Q9BQ39 737 aaKnown RBP18.25■□□□□ 0.51
CTSB-222ENST00000531551 TLR10Q9BXR5 811 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 OSBPL2Q9H1P3 480 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 DUS2Q9NX74 493 aaKnown RBP18.25■□□□□ 0.51
CTSB-222ENST00000531551 OBP2AQ9NY56 170 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 TBC1D14Q9P2M4 693 aa18.25■□□□□ 0.51
CTSB-222ENST00000531551 ESPNB1AK53 854 aa18.24■□□□□ 0.51
CTSB-222ENST00000531551 KCNK3O14649 394 aa18.24■□□□□ 0.51
CTSB-222ENST00000531551 ZRANB2O95218 330 aaKnown RBP eCLIP18.24■□□□□ 0.51
CTSB-222ENST00000531551 LATS1O95835 1130 aa18.24■□□□□ 0.51
CTSB-222ENST00000531551 L1CAMP32004 1257 aa18.24■□□□□ 0.51
CTSB-222ENST00000531551 PEX5P50542 639 aa18.24■□□□□ 0.51
CTSB-222ENST00000531551 DPYSL2Q16555 572 aa18.24■□□□□ 0.51
CTSB-222ENST00000531551 AAK1Q2M2I8 961 aa18.24■□□□□ 0.51
CTSB-222ENST00000531551 LRRC31Q6UY01 552 aa18.24■□□□□ 0.51
CTSB-222ENST00000531551 TPGS1Q6ZTW0 290 aa18.24■□□□□ 0.51
CTSB-222ENST00000531551 MAP7D3Q8IWC1 876 aa18.24■□□□□ 0.51
CTSB-222ENST00000531551 MFSD6LQ8IWD5 586 aa18.24■□□□□ 0.51
CTSB-222ENST00000531551 KATNAL2Q8IYT4 538 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms