RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 MMRN1Q13201 1228 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 FAM78AQ5JUQ0 283 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 FAM72AQ5TYM5 149 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 PIK3R6Q5UE93 754 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 RAP1GAP2Q684P5 730 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 FAM72DQ6L9T8 149 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 MFSD7Q6UXD7 560 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 ANKS1BQ7Z6G8 1248 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 FAM72BQ86X60 149 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 UBE2Q2Q8WVN8 375 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 CAPZA3Q96KX2 299 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 HAPLN3Q96S86 360 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 MYADMQ96S97 322 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 OR12D3Q9UGF7 316 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 ZMYM5Q9UJ78 669 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 LSM7Q9UK45 103 aaKnown RBP19.72■□□□□ 0.75
SMPD1-205ENST00000531303 CDH7Q9ULB5 785 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 HS3ST4Q9Y661 456 aa19.72■□□□□ 0.75
SMPD1-205ENST00000531303 NUP210Q8TEM1 1887 aaPredicted RBP19.71■□□□□ 0.75
SMPD1-205ENST00000531303 GRXCR2A6NFK2 248 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 VIPR2P41587 438 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 ARSEP51690 589 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 AMPD2Q01433 879 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 MS4A13Q5J8X5 152 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 SEL1L2Q5TEA6 688 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 KAZNQ674X7 775 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 NADSYN1Q6IA69 706 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 SPOCD1Q6ZMY3 1216 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 C14orf80Q86SX3 495 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 PSTKQ8IV42 348 aaKnown RBP19.71■□□□□ 0.75
SMPD1-205ENST00000531303 RBM41Q96IZ5 413 aaKnown RBP19.71■□□□□ 0.75
SMPD1-205ENST00000531303 MS4A14Q96JA4 679 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 PBKQ96KB5 322 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 HEMGNQ9BXL5 484 aa19.71■□□□□ 0.75
SMPD1-205ENST00000531303 AGO1Q9UL18 857 aaKnown RBP19.71■□□□□ 0.75
SMPD1-205ENST00000531303 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.7■□□□□ 0.74
SMPD1-205ENST00000531303 C3orf70A6NLC5 250 aaPredicted RBP19.7■□□□□ 0.74
SMPD1-205ENST00000531303 EEF2KO00418 725 aaKnown RBP19.7■□□□□ 0.74
SMPD1-205ENST00000531303 TRDMT1O14717 391 aaKnown RBP19.7■□□□□ 0.74
SMPD1-205ENST00000531303 ACSL4O60488 711 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 KRT10P13645 584 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 GOT1P17174 413 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 TCP1P17987 556 aaKnown RBP19.7■□□□□ 0.74
SMPD1-205ENST00000531303 DPYSL3Q14195 570 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 PDK2Q15119 407 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 DPYSL2Q16555 572 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 CHSY1Q86X52 802 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 DDX42Q86XP3 938 aaKnown RBP eCLIP19.7■□□□□ 0.74
SMPD1-205ENST00000531303 MAP7D3Q8IWC1 876 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 RIN3Q8TB24 985 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 HLA-CQ95604 372 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 NECTIN4Q96NY8 510 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 DCLK3Q9C098 648 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 OSBPL2Q9H1P3 480 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 CARD9Q9H257 536 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 GDE1Q9NZC3 331 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 SMARCAL1Q9NZC9 954 aa19.7■□□□□ 0.74
SMPD1-205ENST00000531303 CWC15Q9P013 229 aaKnown RBP19.7■□□□□ 0.74
SMPD1-205ENST00000531303 ARL4AP40617 200 aa19.69■□□□□ 0.74
SMPD1-205ENST00000531303 CETN2P41208 172 aa19.69■□□□□ 0.74
SMPD1-205ENST00000531303 MLLT6P55198 1093 aaPredicted RBP19.69■□□□□ 0.74
SMPD1-205ENST00000531303 AUHQ13825 339 aaKnown RBP19.69■□□□□ 0.74
SMPD1-205ENST00000531303 RWDD4Q6NW29 188 aaKnown RBP19.69■□□□□ 0.74
SMPD1-205ENST00000531303 RFWD3Q6PCD5 774 aa19.69■□□□□ 0.74
SMPD1-205ENST00000531303 DENND4AQ7Z401 1863 aa19.69■□□□□ 0.74
SMPD1-205ENST00000531303 ADAT2Q7Z6V5 191 aaKnown RBP19.69■□□□□ 0.74
SMPD1-205ENST00000531303 SUSD6Q92537 303 aa19.69■□□□□ 0.74
SMPD1-205ENST00000531303 SMARCD2Q92925 531 aa19.69■□□□□ 0.74
SMPD1-205ENST00000531303 ASB16Q96NS5 453 aa19.69■□□□□ 0.74
SMPD1-205ENST00000531303 RRAGDQ9NQL2 400 aaPredicted RBP19.69■□□□□ 0.74
SMPD1-205ENST00000531303 VANGL2Q9ULK5 521 aa19.69■□□□□ 0.74
SMPD1-205ENST00000531303 H3BRJ5 948 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 DAPK3O43293 454 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 GREM1O60565 184 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 TSPAN3O60637 253 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 LRIG2O94898 1065 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 PRLRP16471 622 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 TACR2P21452 398 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 SLC6A4P31645 630 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 CDKN2BP42772 138 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 VCPP55072 806 aaKnown RBP19.68■□□□□ 0.74
SMPD1-205ENST00000531303 TPI1P60174 286 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 RFX6Q8HWS3 928 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 BBS7Q8IWZ6 715 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 LGI2Q8N0V4 545 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 CELF5Q8N6W0 485 aaKnown RBP19.68■□□□□ 0.74
SMPD1-205ENST00000531303 RSPRY1Q96DX4 576 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 EPAS1Q99814 870 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 MAK16Q9BXY0 300 aaKnown RBP19.68■□□□□ 0.74
SMPD1-205ENST00000531303 OSBPL8Q9BZF1 889 aa19.68■□□□□ 0.74
SMPD1-205ENST00000531303 E9PAM4 449 aa19.67■□□□□ 0.74
SMPD1-205ENST00000531303 AMPD1P23109 780 aa19.67■□□□□ 0.74
SMPD1-205ENST00000531303 IL4RP24394 825 aa19.67■□□□□ 0.74
SMPD1-205ENST00000531303 DYNLT1P63172 113 aa19.67■□□□□ 0.74
SMPD1-205ENST00000531303 SMAD4Q13485 552 aaKnown RBP19.67■□□□□ 0.74
SMPD1-205ENST00000531303 ZNF77Q15935 545 aa19.67■□□□□ 0.74
SMPD1-205ENST00000531303 FAM133BQ5BKY9 247 aaKnown RBP19.67■□□□□ 0.74
SMPD1-205ENST00000531303 ANKRD20A8PQ5CZ79 823 aa19.67■□□□□ 0.74
SMPD1-205ENST00000531303 ADGRF1Q5T601 910 aa19.67■□□□□ 0.74
SMPD1-205ENST00000531303 FBXL22Q6P050 247 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms